FXR2 (Ochotona princeps)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSOPRG00000017108 T19271_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.992
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.783
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000015613 KH 203 262
ENSOPRP00000015613 KH 266 334

Links

Other KH family RBPs
Other Ochotona princeps RBPs

94 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC59682 Xenopus laevis AAC59682 I 0.791
AAC59683 Xenopus laevis AAC59683 I 0.731
AAH43638 Xenopus laevis AAH43638 I 0.798
AAH73457 Xenopus laevis AAH73457 I 0.798
AAI12953 Xenopus laevis AAI12953 I 0.738
AAI31885 Xenopus laevis AAI31885 I 0.798
AAI70204 Xenopus laevis AAI70204 I 0.738
AAY79165 Xenopus laevis AAY79165 I 0.798
AAY79166 Xenopus laevis AAY79166 I 0.798
amel4_ncbi_hmm37854 Apis mellifera amel4_ncbi_hmm37854 I 0.712
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.984
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.783
CABZ01043311.1 Danio rerio ENSDARG00000078462 I 0.772
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.992
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.783
fmr1 Danio rerio ENSDARG00000037433 I 0.754
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.746
FMR1 Canis familiaris ENSCAFG00000019085 I 0.738
FMR1 Oryzias latipes ENSORLG00000009094 I 0.748
FMR1 Gasterosteus aculeatus ENSGACG00000018742 I 0.707
Fxr1 Mus musculus ENSMUSG00000027680 I 0.791
FXR1 Oryzias latipes ENSORLG00000011787 I 0.822
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.760
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.783
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.783
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.783
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.783
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.783
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.791
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.783
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.783
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.783
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.822
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.822
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.798
FXR1 Sus scrofa ENSSSCG00000011769 I 0.775
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.791
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.783
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.783
FXR1 Homo sapiens ENSG00000114416 D 0.783
FXR1 Echinops telfairi ENSETEG00000006891 I 0.783
FXR1 Gasterosteus aculeatus ENSGACG00000006052 I 0.814
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.767
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.783
fxr1 Danio rerio ENSDARG00000022968 I 0.845
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.783
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.783
FXR1 Canis familiaris ENSCAFG00000011582 I 0.783
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.798
FXR1 Equus caballus ENSECAG00000007560 I 0.783
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.806
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.783
FXR1_RAT Rattus norvegicus ENSRNOG00000011938 I 0.705
FXR2 Dasypus novemcinctus ENSDNOG00000001047 I 0.977
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.992
Fxr2 Dipodomys ordii ENSDORG00000014232 I 0.752
FXR2 Tetraodon nigroviridis ENSTNIG00000005118 I 0.831
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.992
fxr2 Danio rerio ENSDARG00000016260 I 0.772
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.992
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.961
FXR2 Choloepus hoffmanni ENSCHOG00000013177 I 0.806
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.823
FXR2 Canis familiaris ENSCAFG00000016685 I 0.984
FXR2 Bos taurus ENSBTAG00000005462 I 0.992
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.992
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.992
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.992
FXR2 Gasterosteus aculeatus ENSGACG00000019983 I 0.745
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.992
Fxr2 Mus musculus ENSMUSG00000018765 I 0.992
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.984
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.992
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.992
FXR2 Myotis lucifugus ENSMLUG00000003438 I 0.961
FXR2 Microcebus murinus ENSMICG00000014799 I 0.992
FXR2 Oryzias latipes ENSORLG00000011571 I 0.869
FXR2 Homo sapiens ENSG00000129245 D 0.992
FXR2 Procavia capensis ENSPCAG00000013184 I 0.984
FXR2 Sus scrofa ENSSSCG00000017953 I 0.992
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.992
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.992
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.992
FXR2 Echinops telfairi ENSETEG00000018613 I 0.984
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.992
FXR2 Felis catus ENSFCAG00000009620 I 0.992
LOC100147323 Equus caballus ENSECAG00000007051 I 0.992
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.712
P51113 Xenopus laevis P51113 I 0.731
P51115 Xenopus laevis P51115 I 0.798
Q2KHP9 Xenopus laevis Q2KHP9 I 0.738
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.806
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.740
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.798