FXR2 (Oryzias latipes)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSORLG00000011571 T19289_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.877
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.792
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000014499 KH 220 279
ENSORLP00000014499 KH 283 351
ENSORLP00000014502 KH 220 279
ENSORLP00000014502 KH 283 368
ENSORLP00000014506 KH 220 279
ENSORLP00000014506 KH 283 351

Links

Other KH family RBPs
Other Oryzias latipes RBPs

98 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC59682 Xenopus laevis AAC59682 I 0.808
AAC59683 Xenopus laevis AAC59683 I 0.767
AAEL009326 Aedes aegypti AAEL009326 I 0.725
AAH43638 Xenopus laevis AAH43638 I 0.815
AAH73457 Xenopus laevis AAH73457 I 0.815
AAI12953 Xenopus laevis AAI12953 I 0.775
AAI31885 Xenopus laevis AAI31885 I 0.815
AAI70204 Xenopus laevis AAI70204 I 0.775
AAY79165 Xenopus laevis AAY79165 I 0.815
AAY79166 Xenopus laevis AAY79166 I 0.815
amel4_ncbi_hmm37854 Apis mellifera amel4_ncbi_hmm37854 I 0.748
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.869
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.792
CABZ01043311.1 Danio rerio ENSDARG00000078462 I 0.897
CPIJ019402 Culex quinquefasciatus CPIJ019402 I 0.710
CpipJ_CPIJ019402 Culex pipiens CpipJ_CPIJ019402 I 0.710
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.877
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.792
FMR1 Gasterosteus aculeatus ENSGACG00000018742 I 0.701
FMR1 Oryzias latipes ENSORLG00000009094 I 0.740
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.783
FMR1 Canis familiaris ENSCAFG00000019085 I 0.767
fmr1 Danio rerio ENSDARG00000037433 I 0.725
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.792
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.792
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.792
Fxr1 Mus musculus ENSMUSG00000027680 I 0.800
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.792
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.792
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.769
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.808
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.792
FXR1 Oryzias latipes ENSORLG00000011787 I 0.815
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.815
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.792
FXR1 Sus scrofa ENSSSCG00000011769 I 0.785
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.808
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.815
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.792
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.792
FXR1 Gasterosteus aculeatus ENSGACG00000006052 I 0.815
FXR1 Echinops telfairi ENSETEG00000006891 I 0.792
FXR1 Equus caballus ENSECAG00000007560 I 0.792
FXR1 Homo sapiens ENSG00000114416 D 0.792
fxr1 Danio rerio ENSDARG00000022968 I 0.846
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.792
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.792
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.777
FXR1 Canis familiaris ENSCAFG00000011582 I 0.792
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.792
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.792
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.792
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.808
FXR1 Meleagris gallopavo ENSMGAG00000009602 I 0.815
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.792
FXR1_RAT Rattus norvegicus ENSRNOG00000011938 I 0.708
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.922
FXR2 Tetraodon nigroviridis ENSTNIG00000005118 I 0.930
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.869
FXR2 Choloepus hoffmanni ENSCHOG00000013177 I 0.731
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.877
FXR2 Dasypus novemcinctus ENSDNOG00000001047 I 0.862
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.877
fxr2 Danio rerio ENSDARG00000016260 I 0.897
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.877
FXR2 Bos taurus ENSBTAG00000005462 I 0.877
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.877
FXR2 Canis familiaris ENSCAFG00000016685 I 0.869
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.877
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.877
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.877
FXR2 Microcebus murinus ENSMICG00000014799 I 0.877
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.869
FXR2 Gasterosteus aculeatus ENSGACG00000019983 I 0.904
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.877
Fxr2 Mus musculus ENSMUSG00000018765 I 0.877
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.877
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.877
FXR2 Myotis lucifugus ENSMLUG00000003438 I 0.862
FXR2 Homo sapiens ENSG00000129245 D 0.877
FXR2 Procavia capensis ENSPCAG00000013184 I 0.869
FXR2 Sus scrofa ENSSSCG00000017953 I 0.877
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.877
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.877
FXR2 Echinops telfairi ENSETEG00000018613 I 0.869
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.869
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.877
FXR2 Felis catus ENSFCAG00000009620 I 0.877
LOC100147323 Equus caballus ENSECAG00000007051 I 0.877
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.748
P51113 Xenopus laevis P51113 I 0.767
P51115 Xenopus laevis P51115 I 0.815
PHUM440700 Pediculus humanus PHUM440700 I 0.733
Q2KHP9 Xenopus laevis Q2KHP9 I 0.775
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 0.815
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.769
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.815