GLRG_00177 (Colletotrichum graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GLRG_00177 T29388_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GLRG_00177T0 RRM 61 131

Links

Other RRM family RBPs
Other Colletotrichum graminicola RBPs

114 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29983.m003140 Ricinus communis 29983.m003140 N 0.000
A9PIB0_POPTR Populus trichocarpa POPTR_0007s01170 N 0.000
AAH72902 Xenopus laevis AAH72902 N 0.000
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.746
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.704
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.704
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.732
B9MYE5_POPTR Populus trichocarpa POPTR_0017s04640 N 0.000
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.704
Bm1_02935 Brugia malayi Bm1_02935 N 0.704
BRADI3G48560 Brachypodium distachyon BRADI3G48560 N 0.000
cassava43645.valid.m1 Manihot esculenta cassava43645.valid.m1 N 0.000
cassava43646.valid.m1 Manihot esculenta cassava43646.valid.m1 N 0.000
CBP20 Arabidopsis thaliana AT5G44200-TAIR-G N 0.000
chr3.CM0160.780.nd Lotus japonicus chr3.CM0160.780.nd N 0.000
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.000
Cucsa.174450 Cucumis sativus Cucsa.174450 N 0.000
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.000
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.000
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.704
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.718
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.000
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.000
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.704
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.704
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.704
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.704
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.000
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.000
e_gw1.80.70.1 Selaginella moellendorfii e_gw1.80.70.1 N 0.746
Glyma12g33400.1 Glycine max Glyma12g33400.1 N 0.000
Glyma13g37030.1 Glycine max Glyma13g37030.1 N 0.000
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.000
GSVIVG00020599001 Vitis vinifera GSVIVG00020599001 N 0.000
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.732
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.732
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.000
gw1.14.317.1 Chlorella NC64A gw1.14.317.1 N 0.000
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.845
LOAG_03270 Loa loa LOAG_03270 N 0.718
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.000
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.704
LOC_Os02g39890 Oryza sativa LOC_Os02g39890 N 0.000
MDP0000315402 Malus x domestica MDP0000315402 N 0.000
mgf009822m Mimulus guttatus mgf009822m N 0.000
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.746
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.746
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.704
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.704
NCBP2 Equus caballus ENSECAG00000016153 N 0.704
NCBP2 Homo sapiens ENSG00000114503 N 0.704
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.704
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.000
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.704
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.704
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.704
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.000
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.704
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.704
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.704
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.704
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.704
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.704
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.000
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.704
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.000
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.704
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.718
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.000
P52299 Xenopus laevis P52299 N 0.000
PDK_20s1327431g003 Phoenix dactylifera PDK_20s1327431g003 N 0.000
PHUM535920 Pediculus humanus PHUM535920 N 0.761
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.704
PK11911.1 Cannabis sativa PK11911.1 N 0.000
ppa010346m Prunus persica ppa010346m N 0.000
SB04G025800 Sorghum bicolor Sb04g025800 N 0.000
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.718
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.000
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.704
XM_002863560.1 Arabidopsis lyrata fgenesh2_kg.8__389__AT5G44200.2 N 0.000
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.000