estExt_Genewise1.C_5160046 (Capitella teleta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_5160046 T51286_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_5160046 RRM 37 107

Links

Other RRM family RBPs
Other Capitella teleta RBPs

100 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
P52299 Xenopus laevis P52299 N 0.831
GK11244 Drosophila willistoni FBgn0213255 N 0.831
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.831
GJ18756 Drosophila virilis FBgn0205908 N 0.831
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.831
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.831
AAH72902 Xenopus laevis AAH72902 N 0.831
91084 Helobdella robusta 91084 N 0.831
CAA59259 Xenopus laevis CAA59259 N 0.817
Cbp20 Drosophila melanogaster FBgn0022943 N 0.817
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.817
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.817
2118330B Xenopus laevis 2118330B N 0.817
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.817
GF16759 Drosophila ananassae FBgn0093780 N 0.817
GD19204 Drosophila simulans FBgn0190709 N 0.817
GJ23276 Drosophila virilis FBgn0210378 N 0.817
GH15101 Drosophila grimshawi FBgn0122576 N 0.817
GM15280 Drosophila sechellia FBgn0170200 N 0.817
GL12592 Drosophila persimilis FBgn0150198 N 0.817
GE25514 Drosophila yakuba FBgn0242580 N 0.817
GI23717 Drosophila mojavensis FBgn0146442 N 0.817
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.803
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.803
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.803
ncbp2 Danio rerio ENSDARG00000014898 N 0.803
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.803
GG22670 Drosophila erecta FBgn0114835 N 0.803
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.803
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.803
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.803
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.789
PHUM535920 Pediculus humanus PHUM535920 N 0.789
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.789
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.775
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.775
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.775
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.775
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.775
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.775
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.761
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.761
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.761
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.761
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.761
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.761
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.761
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.761
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.761
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.761
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.761
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.761
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.761
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.761
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.761
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.761
NCBP2 Equus caballus ENSECAG00000016153 N 0.761
NCBP2 Homo sapiens ENSG00000114503 N 0.761
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.761
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.761
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.761
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.761
LOAG_03270 Loa loa LOAG_03270 N 0.761
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.761
NCBP2 Gallus gallus ENSGALG00000006843 N 0.761
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.761
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.761
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.761
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.761
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.746
Minc02990 Meloidogyne incognita Minc02990 N 0.746
Minc06129 Meloidogyne incognita Minc06129 N 0.746
Bm1_02935 Brugia malayi Bm1_02935 N 0.746
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.746
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.746
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.746
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.746
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.746
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.746
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.746
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.746
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.746
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.746
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.746
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.732
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.732
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.732
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.732
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.732
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.732
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.732
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.718
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.718
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.718
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.704
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.704
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.704
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.704
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.704
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.704