Aqu1.228507 (Amphimedon queenslandica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Aqu1.228507 T49053_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.228507 RRM 32 102

Links

Other RRM family RBPs
Other Amphimedon queenslandica RBPs

113 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.775
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.761
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.761
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.761
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.761
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.761
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.746
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.746
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.746
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.746
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.746
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.732
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.732
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.732
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.732
P52299 Xenopus laevis P52299 N 0.732
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.732
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.732
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.732
LOAG_03270 Loa loa LOAG_03270 N 0.732
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.732
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.732
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.732
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.732
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.732
CAA59259 Xenopus laevis CAA59259 N 0.732
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.732
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.732
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.732
PHUM535920 Pediculus humanus PHUM535920 N 0.732
NCBP2 Homo sapiens ENSG00000114503 N 0.732
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.732
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.732
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.732
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.732
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.732
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.732
NCBP2 Equus caballus ENSECAG00000016153 N 0.732
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.732
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.732
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.732
2118330B Xenopus laevis 2118330B N 0.732
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.732
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.732
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.732
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.732
AAH72902 Xenopus laevis AAH72902 N 0.732
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.718
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.718
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.718
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.718
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.718
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 Nectria haematococca estExt_fgenesh1_kg.C_sca_10_chr8_2_00014 N 0.718
AFLA_046450 Aspergillus flavus CADAFLAG00005972 N 0.718
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.718
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.718
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.718
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.718
NCU00210 Neurospora crassa NCU00210 N 0.718
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.718
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.718
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.718
EFA74823.1 Polysphondylium pallidum EFA74823.1 N 0.718
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.718
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.718
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.718
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.718
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.718
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.718
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.718
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.718
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.718
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.718
FVEG_07036 Fusarium verticillioides FVEG_07036 N 0.718
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.718
Bm1_02935 Brugia malayi Bm1_02935 N 0.718
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.718
91084 Helobdella robusta 91084 N 0.704
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.704
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.704
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.704
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.704
An12g03930 Aspergillus niger CADANGAG00009835 N 0.704
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.704
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.704
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.704
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.704
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.704
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.704
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.704
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.704
GID1.0044779 Dictyostelium purpureum GID1.0044779 N 0.704
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.704
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.704
fgenesh1_pg.C_scaffold_1000747 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1000747 N 0.704
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.704
fgenesh1_pm.00772_#_82 Aspergillus carbonarius fgenesh1_pm.00772_#_82 N 0.704
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.704
GLRG_00177 Colletotrichum graminicola GLRG_00177 N 0.704
TERG_03424 Trichophyton rubrum TERG_03424 N 0.704
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.704
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.704
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.704
NCBP2 Gallus gallus ENSGALG00000006843 N 0.704
ncbp2 Dictyostelium discoideum DDB_G0287197 N 0.704
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.704
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.704
MCYG_04468 Microsporum canis MCYG_04468 N 0.704
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.704
MGG_06296 Magnaporthe oryzae MGG_06296 N 0.704
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.704
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.704
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.704