CpipJ_CPIJ003555 (Culex pipiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CpipJ_CPIJ003555 T28895_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ003555-RA RRM 36 106

Links

Other RRM family RBPs
Other Culex pipiens RBPs

129 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 1.000
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.958
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.901
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.859
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.845
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.845
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.845
P52299 Xenopus laevis P52299 N 0.831
AAH72902 Xenopus laevis AAH72902 N 0.831
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.831
GI23717 Drosophila mojavensis FBgn0146442 N 0.817
GH15101 Drosophila grimshawi FBgn0122576 N 0.817
Cbp20 Drosophila melanogaster FBgn0022943 N 0.817
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.817
NCBP2 Gallus gallus ENSGALG00000006843 N 0.817
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.817
GF16759 Drosophila ananassae FBgn0093780 N 0.817
GG22670 Drosophila erecta FBgn0114835 N 0.817
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.817
PHUM535920 Pediculus humanus PHUM535920 N 0.817
GK11244 Drosophila willistoni FBgn0213255 N 0.817
CAA59259 Xenopus laevis CAA59259 N 0.817
2118330B Xenopus laevis 2118330B N 0.817
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.817
GJ23276 Drosophila virilis FBgn0210378 N 0.817
GE25514 Drosophila yakuba FBgn0242580 N 0.817
GL12592 Drosophila persimilis FBgn0150198 N 0.817
GD19204 Drosophila simulans FBgn0190709 N 0.817
GM15280 Drosophila sechellia FBgn0170200 N 0.817
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.803
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.803
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.803
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.803
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.803
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.803
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.803
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.803
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.803
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.803
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.803
GJ18756 Drosophila virilis FBgn0205908 N 0.803
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.803
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.803
91084 Helobdella robusta 91084 N 0.803
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.803
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.803
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.803
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.803
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.803
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.803
NCBP2 Equus caballus ENSECAG00000016153 N 0.803
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.803
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.803
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.803
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.803
NCBP2 Homo sapiens ENSG00000114503 N 0.803
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.803
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.803
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.803
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.789
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.789
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.789
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.789
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.789
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.789
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.789
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.789
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.789
LOAG_03270 Loa loa LOAG_03270 N 0.789
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.789
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.789
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.775
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.775
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.775
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.775
Bm1_02935 Brugia malayi Bm1_02935 N 0.775
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.775
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.761
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.761
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.761
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.761
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.761
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.761
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.761
ncbp2 Danio rerio ENSDARG00000014898 N 0.761
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.761
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.746
Sjc_0008080 Schistosoma japonicum Sjc_0008080 N 0.746
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.746
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.746
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.732
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 0.732
Minc06129 Meloidogyne incognita Minc06129 N 0.732
XP_001187788.1 Strongylocentrotus purpuratus XP_001187788.1 N 0.732
Minc02990 Meloidogyne incognita Minc02990 N 0.732
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.732
NCBP2 Gasterosteus aculeatus ENSGACG00000006238 N 0.732
NCBP2 Sorex araneus ENSSARG00000014294 N 0.732
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.732
PABG_07236 Paracoccidioides brasiliensis PABG_07236 N 0.718
CPSG_08054 Coccidioides posadasii CPSG_08054 N 0.718
PTRG_00402 Pyrenophora tritici repentis PTRG_00402 N 0.718
TEQG_01953 Trichophyton equinum TEQG_01953 N 0.718
MGYG_02166 Microsporum gypseum MGYG_02166 N 0.718
TESG_01120 Trichophyton tonsurans TESG_01120 N 0.718
MCYG_04468 Microsporum canis MCYG_04468 N 0.718
TERG_03424 Trichophyton rubrum TERG_03424 N 0.718
EAT82863.2 Phaeosphaeria nodorum EAT82863.2 N 0.718
SNOG_09598 Stagonospora nodorum SNOG_09598 N 0.718
estExt_Genewise1.C_10147 Cochliobolus heterostrophus C5 estExt_Genewise1.C_10147 N 0.718
CIMG_00837 Coccidioides immitis CIMG_00837 N 0.718
estExt_Genewise1Plus.C_150343 Trichoderma atroviride estExt_Genewise1Plus.C_150343 N 0.718
HCAG_07341 Histoplasma capsulatum HCAG_07341 N 0.718
BDBG_08091 Blastomyces dermatitidis BDBG_08091 N 0.718
NFIA_084190 Neosartorya fischeri CADNFIAG00008064 N 0.704
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.704
AFUA_2G08570 Aspergillus fumigatus CADAFUAG00004718 N 0.704
gw1.12.351.1 Coccomyxa C 169 gw1.12.351.1 N 0.704
SB04G025800 Sorghum bicolor Sb04g025800 N 0.704
Aqu1.228507 Amphimedon queenslandica Aqu1.228507 N 0.704
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.704
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.704
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.704
GRMZM2G034804 Zea mays GRMZM2G034804 N 0.704
Pc13g04070 Penicillium chrysogenum Pc13g04070 N 0.704
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.704
gw1.11.372.1 Chlorella vulgaris gw1.11.372.1 N 0.704
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.704
PMAA_070830 Penicillium marneffei PMAA_070830 N 0.704