A5A2G2_CHICK (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000002413 T37614_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.886
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000003792 RRM 11 79
ENSGALP00000003792 RRM 278 348

Links

Other RRM family RBPs
Other Gallus gallus RBPs

60 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
62054 Helobdella robusta 62054 I 0.800
90208 Helobdella robusta 90208 I 0.787
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.936
AAEL014033 Aedes aegypti AAEL014033 I 0.886
AGAP004950 Anopheles gambiae AGAP004950 I 0.886
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.893
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.714
bru-3 Drosophila melanogaster FBgn0262350 D 0.886
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.986
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 1.000
BRUNOL6 Homo sapiens ENSG00000140488 D 0.821
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.721
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.721
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.736
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.836
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.993
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.886
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.893
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.893
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.893
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.886
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.850
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.893
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.714
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.879
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.886
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.900
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.921
CELF6 Oryzias latipes ENSORLG00000013392 I 0.929
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.821
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.921
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.829
Celf6 Mus musculus ENSMUSG00000032297 I 0.829
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.943
CJA07020 Caenorhabditis japonica CJA07020 I 0.764
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.707
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.814
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.800
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.707
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.879
GD12651 Drosophila simulans FBgn0184378 I 0.886
GE20053 Drosophila yakuba FBgn0237378 I 0.886
GF10965 Drosophila ananassae FBgn0088005 I 0.886
GG13757 Drosophila erecta FBgn0106020 I 0.886
GH14684 Drosophila grimshawi FBgn0122160 I 0.879
GI13095 Drosophila mojavensis FBgn0135852 I 0.879
GJ13842 Drosophila virilis FBgn0201061 I 0.879
GK17101 Drosophila willistoni FBgn0219100 I 0.886
GL21647 Drosophila persimilis FBgn0159240 I 0.857
GM24582 Drosophila sechellia FBgn0179445 I 0.886
HEXA Macaca mulatta ENSMMUG00000010687 I 0.821
LOAG_05508 Loa loa LOAG_05508 I 0.807
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.721
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.821
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.871
PHUM315130 Pediculus humanus PHUM315130 I 0.914
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.721
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.757
Smp_041280 Schistosoma mansoni Smp_041280 I 0.821
Smp_131780 Schistosoma mansoni Smp_131780 I 0.757