Q9PTI4_CHICK (Gallus gallus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSGALG00000012852 T02732_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000020932 CCCH ZF 49 74
ENSGALP00000020932 CCCH ZF 82 103
ENSGALP00000020932 CCCH ZF 199 224
ENSGALP00000020932 CCCH ZF 357 382

Links

Other CCCH ZF family RBPs
Other Gallus gallus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.817
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.970
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.804
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.808
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.827
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.875
mkrn1 Danio rerio ENSDARG00000041665 N 0.783
LOC100065893 Equus caballus ENSECAG00000017929 N 0.817
MKRN1 Felis catus ENSFCAG00000013043 N 0.808
MKRN1 Gasterosteus aculeatus ENSGACG00000019227 N 0.748
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.875
MKRN1 Homo sapiens ENSG00000133606 N 0.875
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.865
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.817
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.792
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.970
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.930
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.846
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.970
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.875
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.881
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.808
MKRN1 Oryzias latipes ENSORLG00000012765 N 0.752
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.769
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.885
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.808
ENSPPYG00000020255 Pongo pygmaeus ENSPPYG00000020255 N 0.824
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.833
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.865
MKRN1 Sorex araneus ENSSARG00000013683 N 0.750
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.875
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.910
NP_001072050.1 Takifugu rubripes ENSTRUG00000012057 N 0.738
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.760
MKRN1 Tetraodon nigroviridis ENSTNIG00000007231 N 0.728
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.875
AAH74368 Xenopus laevis AAH74368 N 0.820
Q6GLT5 Xenopus laevis Q6GLT5 N 0.820