e_gw1.10.437.1 (Cryphonectria parasitica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 e_gw1.10.437.1 T06034_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.10.437.1 CCCH ZF 35 59
e_gw1.10.437.1 CCCH ZF 64 87

Links

Other CCCH ZF family RBPs
Other Cryphonectria parasitica RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ADR062W Ashbya gossypii ADR062W N 0.725
ACLA_033580 Aspergillus clavatus CADACLAG00003610 N 0.712
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.939
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.898
FOXG_04082 Fusarium oxysporum FOXG_04082 N 0.878
FVEG_07196 Fusarium verticillioides FVEG_07196 N 0.878
KLLA0B09878g Kluyveromyces lactis KLLA0B09878g N 0.725
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.725
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.939
estExt_fgenesh1_kg.C_60003 Myceliophthora thermophila estExt_fgenesh1_kg.C_60003 N 0.900
estExt_fgenesh1_pg.C_120231 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_120231 N 0.720
estExt_Genewise1Plus.C_chr_60126 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_60126 N 0.720
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.918
NCU05007 Neurospora crassa NCU05007 N 0.959
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.959
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.959
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.918
LEE1 Saccharomyces cerevisiae YPL054W N 0.720
23616_YPL054W Saccharomyces paradoxus 23616_YPL054W N 0.720
SJAG_01535 Schizosaccharomyces japonicus SJAG_01535 N 0.700
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.920
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.880
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.900
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.900
VDBG_09822 Verticillium albo atrum VDBG_09822 N 0.880
VDAG_09556 Verticillium dahliae VDAG_09556 N 0.880