PK00513.1 (Cannabis sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PK00513.1 T31617_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK00513.1 RRM 2 70
PK00513.1 RRM 108 177

Links

Other RRM family RBPs
Other Cannabis sativa RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R002664 Ailuropoda melanoleuca Ame_R002664 I 0.000
Ame_R011226 Ailuropoda melanoleuca Ame_R011226 I 0.000
Ame_R004201 Ailuropoda melanoleuca Ame_R004201 N 0.000
MBNL2 Anolis carolinensis ENSACAG00000000969 I 0.000
MBNL1 Anolis carolinensis ENSACAG00000008014 I 0.000
MBNL3 Anolis carolinensis ENSACAG00000009557 I 0.000
MBNL3 Bos taurus ENSBTAG00000014088 I 0.000
A5PKK4_BOVIN Bos taurus ENSBTAG00000018313 I 0.000
A5PJM0_BOVIN Bos taurus ENSBTAG00000004564 N 0.000
LOC100403733 Callithrix jacchus ENSCJAG00000004294 I 0.000
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.000
LOC100392264 Callithrix jacchus ENSCJAG00000001054 I 0.000
MBNL3 Canis familiaris ENSCAFG00000018841 I 0.000
MBNL2 Canis familiaris ENSCAFG00000005523 I 0.000
MBNL1 Canis familiaris ENSCAFG00000008603 I 0.000
MBNL3 Cavia porcellus ENSCPOG00000008092 N 0.000
MBNL2 Cavia porcellus ENSCPOG00000010320 I 0.000
MBNL1 Cavia porcellus ENSCPOG00000011516 I 0.000
MBNL2 Choloepus hoffmanni ENSCHOG00000000049 I 0.000
mbnl2 Danio rerio ENSDARG00000018460 I 0.000
mbnl3 Danio rerio ENSDARG00000016085 I 0.000
MBNL1 Dasypus novemcinctus ENSDNOG00000012815 I 0.000
MBNL3 Dasypus novemcinctus ENSDNOG00000016518 I 0.000
MBNL2 Dasypus novemcinctus ENSDNOG00000018141 N 0.000
Mbnl3 Dipodomys ordii ENSDORG00000012854 I 0.000
MBNL1 Echinops telfairi ENSETEG00000016568 N 0.000
MBNL3 Echinops telfairi ENSETEG00000015907 N 0.000
MBNL2 Echinops telfairi ENSETEG00000003784 I 0.000
LOC100050018 Equus caballus ENSECAG00000024349 I 0.000
LOC100054316 Equus caballus ENSECAG00000021076 I 0.000
MBNL1 Erinaceus europaeus ENSEEUG00000009449 I 0.000
MBNL2 Erinaceus europaeus ENSEEUG00000006209 I 0.000
MBNL1 Felis catus ENSFCAG00000002293 N 0.000
MBNL2 Felis catus ENSFCAG00000005148 N 0.000
A3F958_CHICK Gallus gallus ENSGALG00000016890 I 0.000
A5HMN7_CHICK Gallus gallus ENSGALG00000006066 I 0.000
MBNL1_CHICK Gallus gallus ENSGALG00000010361 I 0.000
MBNL1 Gasterosteus aculeatus ENSGACG00000015003 I 0.000
ENSGACG00000004222 Gasterosteus aculeatus ENSGACG00000004222 I 0.000
MBNL1 Gasterosteus aculeatus ENSGACG00000010253 I 0.000
MBNL3 Gasterosteus aculeatus ENSGACG00000017015 I 0.000
ENSGACG00000015105 Gasterosteus aculeatus ENSGACG00000015105 I 0.000
MBNL3 Gorilla gorilla ENSGGOG00000007756 I 0.000
MBNL2 Gorilla gorilla ENSGGOG00000008349 I 0.000
MBNL2 Homo sapiens ENSG00000139793 I 0.000
MBNL3 Homo sapiens ENSG00000076770 I 0.000
MBNL1 Homo sapiens ENSG00000152601 D 0.000
MBNL1 Loxodonta africana ENSLAFG00000017683 I 0.000
MBNL2 Loxodonta africana ENSLAFG00000014497 I 0.000
MBNL3 Loxodonta africana ENSLAFG00000011822 I 0.000
MBNL2 Macaca mulatta ENSMMUG00000022744 N 0.000
MBNL1 Macaca mulatta ENSMMUG00000015910 I 0.000
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.000
MBNL1 Macropus eugenii ENSMEUG00000006617 I 0.000
MBNL2 Macropus eugenii ENSMEUG00000016143 I 0.000
MBNL3 Macropus eugenii ENSMEUG00000001183 I 0.000
MBNL2 Meleagris gallopavo ENSMGAG00000014904 I 0.000
MBNL1 Meleagris gallopavo ENSMGAG00000010862 N 0.000
MBNL3 Meleagris gallopavo ENSMGAG00000003064 I 0.000
MBNL3 Microcebus murinus ENSMICG00000017340 I 0.000
MBNL2 Monodelphis domestica ENSMODG00000008566 I 0.000
MBNL3 Monodelphis domestica ENSMODG00000015304 I 0.000
MBNL1 Monodelphis domestica ENSMODG00000015838 I 0.000
Mbnl3 Mus musculus ENSMUSG00000036109 I 0.000
Mbnl1 Mus musculus ENSMUSG00000027763 I 0.000
Mbnl2 Mus musculus ENSMUSG00000022139 I 0.000
MBNL2 Myotis lucifugus ENSMLUG00000010920 I 0.000
MBNL1 Myotis lucifugus ENSMLUG00000014029 I 0.000
MBNL3 Myotis lucifugus ENSMLUG00000016240 I 0.000
MBNL1 Ochotona princeps ENSOPRG00000009633 I 0.000
MBNL2 Ochotona princeps ENSOPRG00000007427 I 0.000
MBNL1 Ornithorhynchus anatinus ENSOANG00000007992 I 0.000
MBNL3 Ornithorhynchus anatinus ENSOANG00000011697 I 0.000
MBNL2 Ornithorhynchus anatinus ENSOANG00000014911 I 0.000
MBNL3 Oryctolagus cuniculus ENSOCUG00000014979 I 0.000
MBNL1 Oryctolagus cuniculus ENSOCUG00000007601 I 0.000
MBNL2 Oryctolagus cuniculus ENSOCUG00000000220 I 0.000
MBNL1 Oryzias latipes ENSORLG00000015858 I 0.000
MBNL1 Oryzias latipes ENSORLG00000005925 I 0.000
ENSORLG00000005419 Oryzias latipes ENSORLG00000005419 I 0.000
MBNL3 Oryzias latipes ENSORLG00000002183 I 0.000
MBNL2 Otolemur garnettii ENSOGAG00000017001 N 0.000
MBNL1 Otolemur garnettii ENSOGAG00000009336 N 0.000
MBNL1 Pan troglodytes ENSPTRG00000015542 I 0.000
MBNL2 Pan troglodytes ENSPTRG00000005982 I 0.000
ENSPPYG00000020726 Pongo pygmaeus ENSPPYG00000020726 I 0.000
ENSPPYG00000014218 Pongo pygmaeus ENSPPYG00000014218 I 0.000
ENSPPYG00000005456 Pongo pygmaeus ENSPPYG00000005456 I 0.000
MBNL2 Procavia capensis ENSPCAG00000005151 I 0.000
MBNL1 Procavia capensis ENSPCAG00000002143 N 0.000
MBNL3 Procavia capensis ENSPCAG00000014188 N 0.000
MBNL3 Pteropus vampyrus ENSPVAG00000006115 I 0.000
MBNL2 Pteropus vampyrus ENSPVAG00000003263 I 0.000
MBNL1 Pteropus vampyrus ENSPVAG00000002760 I 0.000
Mbnl2 Rattus norvegicus ENSRNOG00000010737 I 0.000
Q8CIQ0_RAT Rattus norvegicus ENSRNOG00000014076 N 0.000
Mbnl3 Rattus norvegicus ENSRNOG00000002487 I 0.000
MBNL3 Sorex araneus ENSSARG00000006397 I 0.000
MBNL2 Sorex araneus ENSSARG00000002868 I 0.000
MBNL3 Spermophilus tridecemlineatus ENSSTOG00000006715 I 0.000
MBNL1 Spermophilus tridecemlineatus ENSSTOG00000009457 I 0.000
MBNL2 Spermophilus tridecemlineatus ENSSTOG00000013149 I 0.000
XP_001194015.1 Strongylocentrotus purpuratus XP_001194015.1 I 0.000
MBNL2 Sus scrofa ENSSSCG00000009505 I 0.000
MBNL3 Sus scrofa ENSSSCG00000012676 N 0.000
MBNL1 Sus scrofa ENSSSCG00000011720 N 0.000
MBNL3 Taeniopygia guttata ENSTGUG00000002999 I 0.000
MBNL2 Taeniopygia guttata ENSTGUG00000011104 I 0.000
MBNL1 Taeniopygia guttata ENSTGUG00000011341 I 0.000
ENSTRUG00000017351 Takifugu rubripes ENSTRUG00000017351 I 0.000
MBNL1 Takifugu rubripes ENSTRUG00000013858 I 0.000
MBNL3_FUGRU Takifugu rubripes ENSTRUG00000012666 I 0.000
MBN2A_FUGRU Takifugu rubripes ENSTRUG00000010220 I 0.000
MBNL1 Takifugu rubripes ENSTRUG00000001892 I 0.000
MBNL1 Tarsius syrichta ENSTSYG00000010491 I 0.000
MBNL3 Tarsius syrichta ENSTSYG00000014189 N 0.000
MBNL2 Tarsius syrichta ENSTSYG00000004574 I 0.000
MBNL3 Tetraodon nigroviridis ENSTNIG00000016812 I 0.000
ENSTNIG00000013977 Tetraodon nigroviridis ENSTNIG00000013977 I 0.000
MBNL1 Tetraodon nigroviridis ENSTNIG00000007695 N 0.000
MBNL1 Tetraodon nigroviridis ENSTNIG00000003878 I 0.000
MBNL3 Tupaia belangeri ENSTBEG00000008063 N 0.000
MBNL2 Tupaia belangeri ENSTBEG00000005178 I 0.000
MBNL3 Tursiops truncatus ENSTTRG00000016841 I 0.000
MBNL1 Tursiops truncatus ENSTTRG00000009991 I 0.000
MBNL2 Tursiops truncatus ENSTTRG00000008491 I 0.000
MBNL3 Vicugna pacos ENSVPAG00000004743 I 0.000
MBNL2 Vicugna pacos ENSVPAG00000010696 I 0.000
MBNL1 Vicugna pacos ENSVPAG00000006162 I 0.000
mbnl3 Xenopus tropicalis ENSXETG00000005409 I 0.000
mbnl1 Xenopus tropicalis ENSXETG00000021655 I 0.000