GRMZM2G176918 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G176918 T54195_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G176918_P02 RRM 8 76
GRMZM2G176918_P02 RRM 117 186

Links

Other RRM family RBPs
Other Zea mays RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AC198361.3_FG004 Zea mays AC198361.3_FG004 N 1.000
Sb01g019610 Sorghum bicolor Sb01g019610 N 0.971
GRMZM2G167505 Zea mays GRMZM2G167505 N 0.971
BRADI3G28430 Brachypodium distachyon BRADI3G28430 N 0.871
LOC_Os10g33230 Oryza sativa LOC_Os10g33230 N 0.856
cassava7388.valid.m1 Manihot esculenta cassava7388.valid.m1 N 0.806
B9HKT4_POPTR Populus trichocarpa POPTR_0008s17030 N 0.799
GSVIVG00028394001 Vitis vinifera GSVIVG00028394001 N 0.799
B9GRF1_POPTR Populus trichocarpa POPTR_0002s26030 N 0.777
PK00513.1 Cannabis sativa PK00513.1 N 0.777
B9HSS5_POPTR Populus trichocarpa POPTR_0010s07790 N 0.777
30008.m000830 Ricinus communis 30008.m000830 N 0.770
GSVIVG00027891001 Vitis vinifera GSVIVG00027891001 N 0.770
ppa005309m Prunus persica ppa005309m N 0.770
Cucsa.037090 Cucumis sativus Cucsa.037090 N 0.763
cassava12598.valid.m1 Manihot esculenta cassava12598.valid.m1 N 0.755
cassava12600.valid.m1 Manihot esculenta cassava12600.valid.m1 N 0.755
cassava12601.valid.m1 Manihot esculenta cassava12601.valid.m1 N 0.755
B9IBE6_POPTR Populus trichocarpa POPTR_0014s18470 N 0.755
cassava12599.valid.m1 Manihot esculenta cassava12599.valid.m1 N 0.755
MDP0000173934 Malus x domestica MDP0000173934 N 0.755
ppa005979m Prunus persica ppa005979m N 0.748
MDP0000217366 Malus x domestica MDP0000217366 N 0.748
Glyma10g33320.1 Glycine max Glyma10g33320.1 N 0.741
Cucsa.383370 Cucumis sativus Cucsa.383370 N 0.741
MDP0000320861 Malus x domestica MDP0000320861 N 0.734
Glyma20g34330.1 Glycine max Glyma20g34330.1 N 0.727
MDP0000130865 Malus x domestica MDP0000130865 N 0.727
chr2.LjT48A12.20.nd Lotus japonicus chr2.LjT48A12.20.nd N 0.721
27613.m000635 Ricinus communis 27613.m000635 N 0.719
MDP0000286430 Malus x domestica MDP0000286430 N 0.719
cassava31392.valid.m1 Manihot esculenta cassava31392.valid.m1 N 0.712
XM_002870277.1 Arabidopsis lyrata fgenesh2_kg.7__2913__AT4G14300.1 N 0.709
AT4G14300 Arabidopsis thaliana AT4G14300-TAIR-G N 0.709
chr2.LjT48A12.190.nd Lotus japonicus chr2.LjT48A12.190.nd N 0.705
gw1.3.93.1 Selaginella moellendorfii gw1.3.93.1 N 0.705
MDP0000609551 Malus x domestica MDP0000609551 N 0.705
MDP0000188788 Malus x domestica MDP0000188788 N 0.705
Medtr3g076980 Medicago truncatula Medtr3g076980 N 0.705
ppa004834m Prunus persica ppa004834m N 0.705
MDP0000204698 Malus x domestica MDP0000204698 N 0.705
ppa005122m Prunus persica ppa005122m N 0.705