MDP0000320861 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000320861 T57645_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000320861 RRM 1145 1213
MDP0000320861 RRM 1249 1318

Links

Other RRM family RBPs
Other Malus x domestica RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000130865 Malus x domestica MDP0000130865 N 0.971
ppa005979m Prunus persica ppa005979m N 0.964
MDP0000286430 Malus x domestica MDP0000286430 N 0.957
Cucsa.037090 Cucumis sativus Cucsa.037090 N 0.849
cassava12599.valid.m1 Manihot esculenta cassava12599.valid.m1 N 0.842
cassava12598.valid.m1 Manihot esculenta cassava12598.valid.m1 N 0.842
cassava12600.valid.m1 Manihot esculenta cassava12600.valid.m1 N 0.842
cassava12601.valid.m1 Manihot esculenta cassava12601.valid.m1 N 0.842
GSVIVG00028394001 Vitis vinifera GSVIVG00028394001 N 0.827
cassava7388.valid.m1 Manihot esculenta cassava7388.valid.m1 N 0.806
B9GRF1_POPTR Populus trichocarpa POPTR_0002s26030 N 0.806
B9IBE6_POPTR Populus trichocarpa POPTR_0014s18470 N 0.799
30008.m000830 Ricinus communis 30008.m000830 N 0.799
B9HSS5_POPTR Populus trichocarpa POPTR_0010s07790 N 0.777
ppa005309m Prunus persica ppa005309m N 0.770
B9HKT4_POPTR Populus trichocarpa POPTR_0008s17030 N 0.770
Cucsa.383370 Cucumis sativus Cucsa.383370 N 0.763
GRMZM2G167505 Zea mays GRMZM2G167505 N 0.748
GSVIVG00027891001 Vitis vinifera GSVIVG00027891001 N 0.748
Glyma10g33320.1 Glycine max Glyma10g33320.1 N 0.741
MDP0000173934 Malus x domestica MDP0000173934 N 0.741
LOC_Os10g33230 Oryza sativa LOC_Os10g33230 N 0.734
AC198361.3_FG004 Zea mays AC198361.3_FG004 N 0.734
MDP0000217366 Malus x domestica MDP0000217366 N 0.734
Sb01g019610 Sorghum bicolor Sb01g019610 N 0.734
GRMZM2G176918 Zea mays GRMZM2G176918 N 0.734
Glyma20g34330.1 Glycine max Glyma20g34330.1 N 0.727
PK00513.1 Cannabis sativa PK00513.1 N 0.719
Glyma08g43740.1 Glycine max Glyma08g43740.1 N 0.705
Glyma18g09090.1 Glycine max Glyma18g09090.1 N 0.705
gw1.3.93.1 Selaginella moellendorfii gw1.3.93.1 N 0.705