LOC_Os10g33230 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os10g33230 T45145_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os10g33230.1 RRM 8 76
LOC_Os10g33230.1 RRM 130 199

Links

Other RRM family RBPs
Other Oryza sativa RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sb01g019610 Sorghum bicolor Sb01g019610 N 0.871
BRADI3G28430 Brachypodium distachyon BRADI3G28430 N 0.863
AC198361.3_FG004 Zea mays AC198361.3_FG004 N 0.856
GRMZM2G167505 Zea mays GRMZM2G167505 N 0.856
GRMZM2G176918 Zea mays GRMZM2G176918 N 0.856
30008.m000830 Ricinus communis 30008.m000830 N 0.784
cassava7388.valid.m1 Manihot esculenta cassava7388.valid.m1 N 0.784
GSVIVG00028394001 Vitis vinifera GSVIVG00028394001 N 0.777
cassava12601.valid.m1 Manihot esculenta cassava12601.valid.m1 N 0.770
cassava12598.valid.m1 Manihot esculenta cassava12598.valid.m1 N 0.770
cassava12600.valid.m1 Manihot esculenta cassava12600.valid.m1 N 0.770
cassava12599.valid.m1 Manihot esculenta cassava12599.valid.m1 N 0.770
B9GRF1_POPTR Populus trichocarpa POPTR_0002s26030 N 0.763
Cucsa.037090 Cucumis sativus Cucsa.037090 N 0.763
B9IBE6_POPTR Populus trichocarpa POPTR_0014s18470 N 0.755
ppa005979m Prunus persica ppa005979m N 0.748
PK00513.1 Cannabis sativa PK00513.1 N 0.741
B9HKT4_POPTR Populus trichocarpa POPTR_0008s17030 N 0.741
B9HSS5_POPTR Populus trichocarpa POPTR_0010s07790 N 0.741
Glyma10g33320.1 Glycine max Glyma10g33320.1 N 0.741
ppa005309m Prunus persica ppa005309m N 0.741
MDP0000320861 Malus x domestica MDP0000320861 N 0.734
Cucsa.383370 Cucumis sativus Cucsa.383370 N 0.734
GSVIVG00027891001 Vitis vinifera GSVIVG00027891001 N 0.734
Glyma20g34330.1 Glycine max Glyma20g34330.1 N 0.727
XM_002870277.1 Arabidopsis lyrata fgenesh2_kg.7__2913__AT4G14300.1 N 0.723
AT4G14300 Arabidopsis thaliana AT4G14300-TAIR-G N 0.723
MDP0000130865 Malus x domestica MDP0000130865 N 0.719
MDP0000217366 Malus x domestica MDP0000217366 N 0.719
gw1.3.93.1 Selaginella moellendorfii gw1.3.93.1 N 0.712
MDP0000173934 Malus x domestica MDP0000173934 N 0.712
MDP0000286430 Malus x domestica MDP0000286430 N 0.712