Sb01g019610 (Sorghum bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sb01g019610 T45881_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb01g019610.1 RRM 8 76
Sb01g019610.1 RRM 122 191
Sb01g019610.2 RRM 8 76
Sb01g019610.2 RRM 122 191

Links

Other RRM family RBPs
Other Sorghum bicolor RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G167505 Zea mays GRMZM2G167505 N 0.971
GRMZM2G176918 Zea mays GRMZM2G176918 N 0.971
AC198361.3_FG004 Zea mays AC198361.3_FG004 N 0.971
BRADI3G28430 Brachypodium distachyon BRADI3G28430 N 0.885
LOC_Os10g33230 Oryza sativa LOC_Os10g33230 N 0.871
cassava7388.valid.m1 Manihot esculenta cassava7388.valid.m1 N 0.806
GSVIVG00028394001 Vitis vinifera GSVIVG00028394001 N 0.806
PK00513.1 Cannabis sativa PK00513.1 N 0.791
B9HKT4_POPTR Populus trichocarpa POPTR_0008s17030 N 0.791
ppa005309m Prunus persica ppa005309m N 0.784
30008.m000830 Ricinus communis 30008.m000830 N 0.777
GSVIVG00027891001 Vitis vinifera GSVIVG00027891001 N 0.777
MDP0000173934 Malus x domestica MDP0000173934 N 0.770
MDP0000217366 Malus x domestica MDP0000217366 N 0.770
B9HSS5_POPTR Populus trichocarpa POPTR_0010s07790 N 0.770
B9GRF1_POPTR Populus trichocarpa POPTR_0002s26030 N 0.763
Cucsa.383370 Cucumis sativus Cucsa.383370 N 0.763
cassava12598.valid.m1 Manihot esculenta cassava12598.valid.m1 N 0.763
cassava12599.valid.m1 Manihot esculenta cassava12599.valid.m1 N 0.763
cassava12601.valid.m1 Manihot esculenta cassava12601.valid.m1 N 0.763
Cucsa.037090 Cucumis sativus Cucsa.037090 N 0.763
cassava12600.valid.m1 Manihot esculenta cassava12600.valid.m1 N 0.763
Glyma10g33320.1 Glycine max Glyma10g33320.1 N 0.755
ppa005979m Prunus persica ppa005979m N 0.755
B9IBE6_POPTR Populus trichocarpa POPTR_0014s18470 N 0.741
Glyma20g34330.1 Glycine max Glyma20g34330.1 N 0.741
MDP0000320861 Malus x domestica MDP0000320861 N 0.734
27613.m000635 Ricinus communis 27613.m000635 N 0.727
XM_002870277.1 Arabidopsis lyrata fgenesh2_kg.7__2913__AT4G14300.1 N 0.723
chr2.LjT48A12.20.nd Lotus japonicus chr2.LjT48A12.20.nd N 0.721
MDP0000130865 Malus x domestica MDP0000130865 N 0.719
cassava31392.valid.m1 Manihot esculenta cassava31392.valid.m1 N 0.719
ppa004834m Prunus persica ppa004834m N 0.719
ppa005122m Prunus persica ppa005122m N 0.719
MDP0000204698 Malus x domestica MDP0000204698 N 0.719
AT4G14300 Arabidopsis thaliana AT4G14300-TAIR-G N 0.716
MDP0000188788 Malus x domestica MDP0000188788 N 0.712
Medtr3g076980 Medicago truncatula Medtr3g076980 N 0.712
chr2.LjT48A12.190.nd Lotus japonicus chr2.LjT48A12.190.nd N 0.712
MDP0000286430 Malus x domestica MDP0000286430 N 0.712
PK25912.1 Cannabis sativa PK25912.1 N 0.712
MDP0000609551 Malus x domestica MDP0000609551 N 0.712
Glyma18g09090.1 Glycine max Glyma18g09090.1 N 0.705
gw1.3.93.1 Selaginella moellendorfii gw1.3.93.1 N 0.705
B9GJW8_POPTR Populus trichocarpa POPTR_0001s37230 N 0.705
AT5G55550 Arabidopsis thaliana AT5G55550-TAIR-G N 0.705