HNRNPAB (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000197451 T37346_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6		 Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M210_0.6 		Tetraodon nigroviridis WRGWUAG RNAcompete
Ray et al.(2013)
RNCMPT00245 		0.814
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000348093 RRM 72 141
ENSP00000348093 RRM 156 225
ENSP00000351108 RRM 72 141
ENSP00000351108 RRM 156 225
ENSP00000384878 RRM 69 138
ENSP00000384878 RRM 153 222
ENSP00000422501 RRM 72 141
ENSP00000422501 RRM 156 225
ENSP00000423495 RRM 72 141
ENSP00000423495 RRM 156 225
ENSP00000425031 RRM 72 141
ENSP00000425031 RRM 156 225
ENSP00000427110 RRM 72 141
ENSP00000427110 RRM 156 225
ENSP00000427465 RRM 72 141
ENSP00000427465 RRM 156 225

Links

Other RRM family RBPs
Other Homo sapiens RBPs

123 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.714
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.755
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.986
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.769
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.929
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.761
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.979
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.714
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.755
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.957
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.714
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.761
LOC100390818 Callithrix jacchus ENSCJAG00000012235 I 0.886
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.707
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.979
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.761
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.714
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.979
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.714
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.714
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.748
hnrnpab Danio rerio ENSDARG00000007960 I 0.850
hnrnpd Danio rerio ENSDARG00000059246 I 0.746
HNRNPAB Danio rerio ENSDARG00000017568 I 0.843
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.993
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.714
Hnrnpd Dipodomys ordii ENSDORG00000012507 I 0.748
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.714
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.761
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.714
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.979
LOC100069254 Equus caballus ENSECAG00000014816 I 0.725
LOC100060733 Equus caballus ENSECAG00000009344 I 0.761
HNRNPAB Erinaceus europaeus ENSEEUG00000013226 I 0.736
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.752
HNRPDL Erinaceus europaeus ENSEEUG00000004301 I 0.700
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.721
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.936
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.755
HNRNPAB Gasterosteus aculeatus ENSGACG00000020830 I 0.821
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.814
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.714
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 1.000
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.761
ENSGGOG00000028444 Gorilla gorilla ENSGGOG00000028444 I 0.886
HNRPDL Homo sapiens ENSG00000152795 I 0.714
HNRNPD Homo sapiens ENSG00000138668 I 0.761
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.755
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.979
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.714
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.714
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.761
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.993
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 0.921
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.714
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.755
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.721
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.936
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.755
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.714
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.714
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.761
ENSMODG00000006825 Monodelphis domestica ENSMODG00000006825 I 0.700
HNRNPAB Monodelphis domestica ENSMODG00000004217 I 0.921
Hnrnpab Mus musculus ENSMUSG00000020358 I 0.964
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.761
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.714
HNRPDL Myotis lucifugus ENSMLUG00000014452 I 0.707
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.754
HNRNPAB Ochotona princeps ENSOPRG00000002546 I 0.979
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.761
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.714
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.762
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.950
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.714
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.714
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.755
HNRNPAB Oryctolagus cuniculus ENSOCUG00000026424 I 0.951
HNRNPAB Oryzias latipes ENSORLG00000015501 I 0.794
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.829
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.746
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.761
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.714
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 1.000
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.761
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.714
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.972
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.714
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.964
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.725
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.761
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.957
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.714
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.754
Hnrnpab Rattus norvegicus ENSRNOG00000003645 I 0.964
HNRNPD Sorex araneus ENSSARG00000006883 I 0.752
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.714
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.761
HNRNPAB Sus scrofa ENSSSCG00000001932 I 0.844
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.936
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.721
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.761
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.723
HNRNPAB Takifugu rubripes ENSTRUG00000008411 I 0.814
HNRNPAB Takifugu rubripes ENSTRUG00000000612 I 0.814
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.755
HNRNPD Tetraodon nigroviridis ENSTNIG00000013499 I 0.752
HNRNPAB Tetraodon nigroviridis ENSTNIG00000010512 D 0.814
HNRNPAB Tetraodon nigroviridis ENSTNIG00000007596 I 0.814
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.714
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.714
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.761
HNRNPAB Tursiops truncatus ENSTTRG00000010604 I 0.779
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.755
AAU25946 Xenopus laevis AAU25946 I 0.732
AAH97855 Xenopus laevis AAH97855 I 0.732
AAH74212 Xenopus laevis AAH74212 I 0.900
AAH43814 Xenopus laevis AAH43814 I 0.886
ABV54637 Xenopus laevis ABV54637 I 0.900
hnrpdl Xenopus tropicalis ENSXETG00000023026 I 0.707
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.754
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.914