HNRNPAB (Ochotona princeps)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOPRG00000002546 T39940_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPAB
M301_0.6 		Homo sapiens Sequence logo not available ACAAAGACAAA SELEX
Cook et al.(2011)
39_12419250 		0.979
HNRNPAB
M210_0.6 		Tetraodon nigroviridis WRGWUAG RNAcompete
Ray et al.(2013)
RNCMPT00245 		0.807
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000002341 RRM 2 71
ENSOPRP00000002341 RRM 86 155

Links

Other RRM family RBPs
Other Ochotona princeps RBPs

122 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R000242 Ailuropoda melanoleuca Ame_R000242 I 0.714
Ame_R000243 Ailuropoda melanoleuca Ame_R000243 I 0.741
Ame_R012484 Ailuropoda melanoleuca Ame_R012484 I 0.993
HNRNPD Anolis carolinensis ENSACAG00000010342 I 0.755
HNRNPAB Anolis carolinensis ENSACAG00000016946 I 0.929
A5D9H5_BOVIN Bos taurus ENSBTAG00000013952 I 0.746
Q3ZC44_BOVIN Bos taurus ENSBTAG00000013627 I 0.986
A4IF81_BOVIN Bos taurus ENSBTAG00000014804 I 0.714
LOC100397832 Callithrix jacchus ENSCJAG00000031195 I 0.741
ENSCJAG00000032456 Callithrix jacchus ENSCJAG00000032456 I 0.950
LOC100412686 Callithrix jacchus ENSCJAG00000015197 I 0.714
LOC100400250 Callithrix jacchus ENSCJAG00000015165 I 0.746
LOC100390818 Callithrix jacchus ENSCJAG00000012235 I 0.879
LOC100404672 Callithrix jacchus ENSCJAG00000005154 I 0.707
HNRNPAB Canis familiaris ENSCAFG00000000241 I 0.986
HNRNPD Canis familiaris ENSCAFG00000025045 I 0.746
ENSCAFG00000008940 Canis familiaris ENSCAFG00000008940 I 0.714
HNRNPAB Cavia porcellus ENSCPOG00000025972 I 0.971
ENSCPOG00000015619 Cavia porcellus ENSCPOG00000015619 I 0.714
ENSCHOG00000000160 Choloepus hoffmanni ENSCHOG00000000160 I 0.714
HNRNPD Choloepus hoffmanni ENSCHOG00000000045 I 0.734
hnrnpab Danio rerio ENSDARG00000007960 I 0.843
hnrnpd Danio rerio ENSDARG00000059246 I 0.746
HNRNPAB Danio rerio ENSDARG00000017568 I 0.836
HNRNPAB Dasypus novemcinctus ENSDNOG00000013820 I 0.986
ENSDNOG00000003887 Dasypus novemcinctus ENSDNOG00000003887 I 0.714
Hnrnpd Dipodomys ordii ENSDORG00000012507 I 0.734
ENSDORG00000000968 Dipodomys ordii ENSDORG00000000968 I 0.714
HNRNPD Echinops telfairi ENSETEG00000016709 I 0.746
Q6X9Z3_HORSE Equus caballus ENSECAG00000022692 I 0.714
ENSECAG00000018242 Equus caballus ENSECAG00000018242 I 0.986
LOC100069254 Equus caballus ENSECAG00000014816 I 0.732
LOC100060733 Equus caballus ENSECAG00000009344 I 0.746
HNRNPAB Erinaceus europaeus ENSEEUG00000013226 I 0.729
HNRNPD Erinaceus europaeus ENSEEUG00000007552 I 0.738
HNRPDL Erinaceus europaeus ENSEEUG00000004301 I 0.700
HNRDL_CHICK Gallus gallus ENSGALG00000023199 I 0.721
Q90626_CHICK Gallus gallus ENSGALG00000014381 I 0.936
Q5ZIH1_CHICK Gallus gallus ENSGALG00000011184 I 0.741
HNRNPAB Gasterosteus aculeatus ENSGACG00000020830 I 0.836
HNRNPAB Gasterosteus aculeatus ENSGACG00000018116 I 0.807
HNRPDL Gorilla gorilla ENSGGOG00000003714 I 0.714
HNRNPAB Gorilla gorilla ENSGGOG00000011692 I 0.979
HNRNPD Gorilla gorilla ENSGGOG00000026760 I 0.746
ENSGGOG00000028444 Gorilla gorilla ENSGGOG00000028444 I 0.879
HNRNPAB Homo sapiens ENSG00000197451 D 0.979
HNRPDL Homo sapiens ENSG00000152795 I 0.714
HNRNPD Homo sapiens ENSG00000138668 I 0.746
HNRNPD Loxodonta africana ENSLAFG00000016483 I 0.741
HNRNPAB Loxodonta africana ENSLAFG00000001189 I 0.971
ENSLAFG00000008612 Loxodonta africana ENSLAFG00000008612 I 0.714
HNRPDL Macaca mulatta ENSMMUG00000015777 I 0.714
HNRNPD Macaca mulatta ENSMMUG00000014030 I 0.746
HNRNPAB Macaca mulatta ENSMMUG00000003996 I 0.986
HNRNPAB Macropus eugenii ENSMEUG00000007909 I 0.921
ENSMEUG00000011454 Macropus eugenii ENSMEUG00000011454 I 0.714
HNRNPD Meleagris gallopavo ENSMGAG00000008051 I 0.741
HNRPDL Meleagris gallopavo ENSMGAG00000008033 I 0.721
HNRNPAB Meleagris gallopavo ENSMGAG00000007727 I 0.936
HNRNPD Microcebus murinus ENSMICG00000010984 I 0.741
HNRPDL Microcebus murinus ENSMICG00000001445 I 0.714
ENSMODG00000011916 Monodelphis domestica ENSMODG00000011916 I 0.714
HNRNPD Monodelphis domestica ENSMODG00000011898 I 0.746
ENSMODG00000006825 Monodelphis domestica ENSMODG00000006825 I 0.700
HNRNPAB Monodelphis domestica ENSMODG00000004217 I 0.921
Hnrnpab Mus musculus ENSMUSG00000020358 I 0.957
Hnrpdl Mus musculus ENSMUSG00000029328 I 0.714
Hnrnpd Mus musculus ENSMUSG00000000568 I 0.746
HNRNPD Myotis lucifugus ENSMLUG00000010628 I 0.746
HNRPDL Myotis lucifugus ENSMLUG00000014452 I 0.707
HNRPDL Ochotona princeps ENSOPRG00000007178 I 0.714
HNRNPD Ochotona princeps ENSOPRG00000009336 I 0.746
HNRNPAB Ornithorhynchus anatinus ENSOANG00000004998 I 0.936
HNRPDL Ornithorhynchus anatinus ENSOANG00000004651 I 0.714
HNRNPD Ornithorhynchus anatinus ENSOANG00000001932 I 0.748
HNRNPD Oryctolagus cuniculus ENSOCUG00000001357 I 0.741
HNRNPAB Oryctolagus cuniculus ENSOCUG00000026424 I 0.972
HNRPDL Oryctolagus cuniculus ENSOCUG00000013805 I 0.714
HNRNPAB Oryzias latipes ENSORLG00000015501 I 0.809
HNRNPAB Oryzias latipes ENSORLG00000005327 I 0.821
HNRNPD Oryzias latipes ENSORLG00000001833 I 0.746
HNRNPD Pan troglodytes ENSPTRG00000016215 I 0.746
HNRPDL Pan troglodytes ENSPTRG00000016217 I 0.714
XR_022913.1 Pan troglodytes ENSPTRG00000017601 I 0.979
ENSPPYG00000014885 Pongo pygmaeus ENSPPYG00000014885 I 0.746
ENSPPYG00000014886 Pongo pygmaeus ENSPPYG00000014886 I 0.714
ENSPPYG00000016107 Pongo pygmaeus ENSPPYG00000016107 I 0.965
HNRPDL Procavia capensis ENSPCAG00000011543 I 0.714
HNRNPD Procavia capensis ENSPCAG00000002182 I 0.711
HNRNPAB Procavia capensis ENSPCAG00000006760 I 0.957
HNRNPD Pteropus vampyrus ENSPVAG00000000003 I 0.746
HNRNPAB Pteropus vampyrus ENSPVAG00000016742 I 0.964
D3ZN89_RAT Rattus norvegicus ENSRNOG00000002270 I 0.714
Hnrpd Rattus norvegicus ENSRNOG00000002292 I 0.739
Hnrnpab Rattus norvegicus ENSRNOG00000003645 I 0.957
HNRNPD Sorex araneus ENSSARG00000006883 I 0.738
HNRPDL Spermophilus tridecemlineatus ENSSTOG00000013979 I 0.714
HNRNPD Spermophilus tridecemlineatus ENSSTOG00000013970 I 0.746
HNRNPAB Sus scrofa ENSSSCG00000001932 I 0.851
HNRNPAB Taeniopygia guttata ENSTGUG00000001168 I 0.936
HNRPDL Taeniopygia guttata ENSTGUG00000002850 I 0.721
HNRNPD Taeniopygia guttata ENSTGUG00000002858 I 0.746
HNRNPD Takifugu rubripes ENSTRUG00000018450 I 0.723
HNRNPAB Takifugu rubripes ENSTRUG00000008411 I 0.829
HNRNPAB Takifugu rubripes ENSTRUG00000000612 I 0.807
HNRNPD Tarsius syrichta ENSTSYG00000010395 I 0.741
HNRNPD Tetraodon nigroviridis ENSTNIG00000013499 I 0.752
HNRNPAB Tetraodon nigroviridis ENSTNIG00000010512 D 0.807
HNRNPAB Tetraodon nigroviridis ENSTNIG00000007596 I 0.814
HNRPDL Tupaia belangeri ENSTBEG00000002817 I 0.714
HNRPDL Tursiops truncatus ENSTTRG00000001793 I 0.714
HNRNPD Tursiops truncatus ENSTTRG00000007592 I 0.746
HNRNPAB Tursiops truncatus ENSTTRG00000010604 I 0.786
HNRNPD Vicugna pacos ENSVPAG00000004374 I 0.741
AAU25946 Xenopus laevis AAU25946 I 0.732
AAH97855 Xenopus laevis AAH97855 I 0.732
AAH74212 Xenopus laevis AAH74212 I 0.886
AAH43814 Xenopus laevis AAH43814 I 0.886
ABV54637 Xenopus laevis ABV54637 I 0.886
hnrpdl Xenopus tropicalis ENSXETG00000023026 I 0.707
hnrnpd Xenopus tropicalis ENSXETG00000012569 I 0.754
hnrnpab Xenopus tropicalis ENSXETG00000003836 I 0.900