CELF5 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000017937 T42384_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.864
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000045983 RRM 5 73
ENSTRUP00000045983 RRM 301 371
ENSTRUP00000045984 RRM 5 73
ENSTRUP00000045984 RRM 299 369
ENSTRUP00000045985 RRM 5 73
ENSTRUP00000045985 RRM 290 360
ENSTRUP00000045986 RRM 5 73
ENSTRUP00000045986 RRM 284 354
ENSTRUP00000045987 RRM 5 73
ENSTRUP00000045987 RRM 283 353
ENSTRUP00000045988 RRM 5 73
ENSTRUP00000045988 RRM 275 345
ENSTRUP00000045989 RRM 4 72
ENSTRUP00000045989 RRM 276 346
ENSTRUP00000045990 RRM 13 59
ENSTRUP00000045990 RRM 261 331

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

67 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R008895 Ailuropoda melanoleuca Ame_R008895 N 0.000
ZRANB3 Bos taurus ENSBTAG00000026842 N 0.000
ZRANB3 Callithrix jacchus ENSCJAG00000011678 N 0.000
ENSCJAG00000016365 Callithrix jacchus ENSCJAG00000016365 N 0.000
ZRANB3 Canis familiaris ENSCAFG00000005054 N 0.000
ZRANB3 Cavia porcellus ENSCPOG00000010385 N 0.000
ZRANB3 Choloepus hoffmanni ENSCHOG00000011223 N 0.000
Zranb3 Dipodomys ordii ENSDORG00000004211 N 0.000
ZRANB3 Echinops telfairi ENSETEG00000011048 N 0.000
ZRANB3 Equus caballus ENSECAG00000011232 N 0.000
ZRANB3 Gorilla gorilla ENSGGOG00000003782 N 0.000
ZRANB3 Homo sapiens ENSG00000121988 N 0.000
ZRANB3 Loxodonta africana ENSLAFG00000015733 N 0.000
ZRANB3 Macaca mulatta ENSMMUG00000000765 N 0.000
ZRANB3 Macropus eugenii ENSMEUG00000009722 N 0.000
ZRANB3 Microcebus murinus ENSMICG00000013893 N 0.000
ZRANB3 Ochotona princeps ENSOPRG00000001431 N 0.000
ZRANB3 Pan troglodytes ENSPTRG00000012492 N 0.000
ENSPPYG00000012814 Pongo pygmaeus ENSPPYG00000012814 N 0.000
ZRANB3 Sorex araneus ENSSARG00000007481 N 0.000
ZRANB3 Spermophilus tridecemlineatus ENSSTOG00000010155 N 0.000
ZRANB3 Tarsius syrichta ENSTSYG00000002816 N 0.000
ZRANB3 Tursiops truncatus ENSTTRG00000003932 N 0.000
ZRANB3 Vicugna pacos ENSVPAG00000001487 N 0.000