GL21647 (Drosophila persimilis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0159240 T43739_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.950
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0185754 RRM 57 122
FBpp0185754 RRM 375 445

Links

Other RRM family RBPs
Other Drosophila persimilis RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL014033 Aedes aegypti AAEL014033 I 0.871
AAEL000695 Aedes aegypti AAEL000695 I 0.700
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.807
AGAP004950 Anopheles gambiae AGAP004950 I 0.871
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.857
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.721
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.707
CJA07020 Caenorhabditis japonica CJA07020 I 0.729
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.721
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.813
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.814
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.814
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.714
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.714
GF10965 Drosophila ananassae FBgn0088005 I 0.950
GG13757 Drosophila erecta FBgn0106020 I 0.950
GH14684 Drosophila grimshawi FBgn0122160 I 0.943
bru-3 Drosophila melanogaster FBgn0262350 D 0.950
GI13095 Drosophila mojavensis FBgn0135852 I 0.943
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.979
GM24582 Drosophila sechellia FBgn0179445 I 0.950
GD12651 Drosophila simulans FBgn0184378 I 0.950
GJ13842 Drosophila virilis FBgn0201061 I 0.943
GK17101 Drosophila willistoni FBgn0219100 I 0.943
GE20053 Drosophila yakuba FBgn0237378 I 0.950
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.719
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.843
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.857
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.836
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.843
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.721
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.786
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.809
62054 Helobdella robusta 62054 I 0.743
90208 Helobdella robusta 90208 I 0.773
BRUNOL6 Homo sapiens ENSG00000140488 D 0.813
LOAG_05508 Loa loa LOAG_05508 I 0.793
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.763
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.850
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.705
HEXA Macaca mulatta ENSMMUG00000010687 I 0.813
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.863
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.814
Celf6 Mus musculus ENSMUSG00000032297 I 0.807
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.879
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.819
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.820
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.857
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.721
CELF6 Oryzias latipes ENSORLG00000013392 I 0.836
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.813
PHUM315130 Pediculus humanus PHUM315130 I 0.893
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.843
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.729
Smp_041280 Schistosoma mansoni Smp_041280 I 0.814
Smp_131780 Schistosoma mansoni Smp_131780 I 0.729
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.857
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.793
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.836
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.850
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.850
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.729