Medtr5g083520 (Medicago truncatula)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Medtr5g083520 T21428_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr5g083520.2 KH 136 209
Medtr5g083520.3 KH 98 173

Links

Other KH family RBPs
Other Medicago truncatula RBPs

52 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.831
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.818
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.785
mgf011994m Mimulus guttatus mgf011994m N 0.776
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.775
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.775
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.771
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.769
MDP0000119110 Malus x domestica MDP0000119110 N 0.762
PK23097.1 Cannabis sativa PK23097.1 N 0.762
MDP0000501473 Malus x domestica MDP0000501473 N 0.762
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.756
MDP0000186494 Malus x domestica MDP0000186494 N 0.753
MDP0000665847 Malus x domestica MDP0000665847 N 0.753
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.753
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.750
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.747
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.747
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.747
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.744
SB02G006770 Sorghum bicolor Sb02g006770 N 0.744
29945.m000086 Ricinus communis 29945.m000086 N 0.743
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.741
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.738
ppa009701m Prunus persica ppa009701m N 0.735
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.735
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.735
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.735
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.735
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.734
27955.m000377 Ricinus communis 27955.m000377 N 0.732
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.730
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.726
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.724
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.723
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.723
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.723
mgf005196m Mimulus guttatus mgf005196m N 0.723
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.723
PK22673.1 Cannabis sativa PK22673.1 N 0.723
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.722
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.720
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.716
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.711
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.711
SB09G023640 Sorghum bicolor Sb09g023640 N 0.711
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.707
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.706
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.706
estExt_gwp_gw1.C_680211 Physcomitrella patens estExt_gwp_gw1.C_680211 N 0.705
28128.m000156 Ricinus communis 28128.m000156 N 0.705