Glyma13g00670.1 (Glycine max)
PUF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF) IPR001313 Glyma13g00670.1 T24891_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma13g00670.1 PUF 499 533
Glyma13g00670.1 PUF 535 569
Glyma13g00670.1 PUF 571 605
Glyma13g00670.1 PUF 607 641
Glyma13g00670.1 PUF 644 678
Glyma13g00670.1 PUF 680 714
Glyma13g00670.1 PUF 716 750
Glyma13g00670.1 PUF 760 792

Links

Other PUF family RBPs
Other Glycine max RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma09g06460.1 Glycine max Glyma09g06460.1 N 0.892
Glyma15g17680.1 Glycine max Glyma15g17680.1 N 0.885
Medtr2g041730 Medicago truncatula Medtr2g041730 N 0.846
PK12245.1 Cannabis sativa PK12245.1 N 0.836
ppa000898m Prunus persica ppa000898m N 0.823
MDP0000265231 Malus x domestica MDP0000265231 N 0.819
GSVIVG00031557001 Vitis vinifera GSVIVG00031557001 N 0.808
POPTR_0022s00840 Populus trichocarpa POPTR_0022s00840 N 0.794
cassava43126.valid.m1 Manihot esculenta cassava43126.valid.m1 N 0.786
mgf002285m Mimulus guttatus mgf002285m N 0.774
ppa016404m Prunus persica ppa016404m N 0.770
mgf006786m Mimulus guttatus mgf006786m N 0.766
cassava9350.m1 Manihot esculenta cassava9350.m1 N 0.762
MDP0000277305 Malus x domestica MDP0000277305 N 0.762
30169.m006300 Ricinus communis 30169.m006300 N 0.748
GSVIVG00029553001 Vitis vinifera GSVIVG00029553001 N 0.747
Cucsa.149730 Cucumis sativus Cucsa.149730 N 0.746
B9HK27_POPTR Populus trichocarpa POPTR_0008s00490 N 0.745
MDP0000313902 Malus x domestica MDP0000313902 N 0.737
BGIOSIBCE028530 Oryza indica BGIOSIBCE028530 N 0.727
LOC_Os08g40830 Oryza sativa LOC_Os08g40830 N 0.727
GRMZM2G035118 Zea mays GRMZM2G035118 N 0.709
e_gw1.96.1.1 Physcomitrella patens e_gw1.96.1.1 N 0.707
Sb07g026995 Sorghum bicolor Sb07g026995 N 0.706