mgf009747m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf009747m T53671_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf009747m RRM 116 186
mgf009747m RRM 210 280

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
mgf001484m Mimulus guttatus mgf001484m N 0.831
ppa009286m Prunus persica ppa009286m N 0.796
GRMZM2G011129 Zea mays GRMZM2G011129 N 0.789
ppa008913m Prunus persica ppa008913m N 0.775
BRADI4G38260 Brachypodium distachyon BRADI4G38260 N 0.775
MDP0000218595 Malus x domestica MDP0000218595 N 0.775
mgf008267m Mimulus guttatus mgf008267m N 0.761
GSVIVG00032361001 Vitis vinifera GSVIVG00032361001 N 0.761
cassava30233.valid.m1 Manihot esculenta cassava30233.valid.m1 N 0.754
SB02G011330 Sorghum bicolor Sb02g011330 N 0.754
LOC_Os09g39180 Oryza sativa LOC_Os09g39180 N 0.754
MDP0000919119 Malus x domestica MDP0000919119 N 0.754
PK05280.1 Cannabis sativa PK05280.1 N 0.754
Glyma06g18470.1 Glycine max Glyma06g18470.1 N 0.746
30147.m013835 Ricinus communis 30147.m013835 N 0.746
B9I3I8_POPTR Populus trichocarpa POPTR_0012s09200 N 0.739
MDP0000528470 Malus x domestica MDP0000528470 N 0.739
CP31B Arabidopsis thaliana AT5G50250-TAIR-G N 0.739
cassava511.valid.m1 Manihot esculenta cassava511.valid.m1 N 0.739
Cucsa.196330 Cucumis sativus Cucsa.196330 N 0.732
B9IF14_POPTR Populus trichocarpa POPTR_0015s09810 N 0.732
A9PG08_POPTR Populus trichocarpa POPTR_0001s35830 N 0.732
GSVIVG00007596001 Vitis vinifera GSVIVG00007596001 N 0.725
XM_002865734.1 Arabidopsis lyrata scaffold_801433.1 N 0.725
GRMZM2G123234 Zea mays GRMZM2G123234 N 0.725
Glyma17g13470.1 Glycine max Glyma17g13470.1 N 0.718
MDP0000296631 Malus x domestica MDP0000296631 N 0.718
MDP0000299693 Malus x domestica MDP0000299693 N 0.718
BGIOSIBCE028840 Oryza indica BGIOSIBCE028840 N 0.711
LOC_Os08g44290 Oryza sativa LOC_Os08g44290 N 0.711
XM_002867599.1 Arabidopsis lyrata fgenesh2_kg.7__1798__AT4G24770.1 N 0.711
SB07G024400 Sorghum bicolor Sb07g024400 N 0.704
cassava512.valid.m1 Manihot esculenta cassava512.valid.m1 N 0.704
Glyma04g36420.1 Glycine max Glyma04g36420.1 N 0.704
Glyma05g02800.1 Glycine max Glyma05g02800.1 N 0.704