GSVIVG00032402001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00032402001 T44767_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00032402001 RRM 43 111
GSVIVT00032402001 RRM 131 201

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29917.m002004 Ricinus communis 29917.m002004 N 0.893
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.893
Glyma16g07660.1 Glycine max Glyma16g07660.1 N 0.871
Glyma19g10300.1 Glycine max Glyma19g10300.1 N 0.871
PK13311.1 Cannabis sativa PK13311.1 N 0.864
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.864
ppa007179m Prunus persica ppa007179m N 0.857
Glyma19g00530.1 Glycine max Glyma19g00530.1 N 0.850
Glyma05g09040.1 Glycine max Glyma05g09040.1 N 0.850
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.843
MDP0000270712 Malus x domestica MDP0000270712 N 0.843
MDP0000303054 Malus x domestica MDP0000303054 N 0.843
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.829
XM_002870653.1 Arabidopsis lyrata fgenesh2_kg.7__3369__AT5G40490.1 N 0.786
AT5G40490 Arabidopsis thaliana AT5G40490-TAIR-G N 0.779
MDP0000303178 Malus x domestica MDP0000303178 N 0.779
mgf016066m Mimulus guttatus mgf016066m N 0.764
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.750
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.743
ppa006963m Prunus persica ppa006963m N 0.736
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.736
29629.m001425 Ricinus communis 29629.m001425 N 0.736
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.729
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.729
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.729
MDP0000191633 Malus x domestica MDP0000191633 N 0.721
MDP0000202850 Malus x domestica MDP0000202850 N 0.721
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.721
MDP0000220851 Malus x domestica MDP0000220851 N 0.714
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.707
BRADI3G39090 Brachypodium distachyon BRADI3G39090 N 0.707
PK22392.1 Cannabis sativa PK22392.1 N 0.707
ppa007812m Prunus persica ppa007812m N 0.700
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.700