Glyma19g00530.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma19g00530.1 T52923_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma19g00530.1 RRM 44 112
Glyma19g00530.1 RRM 132 202

Links

Other RRM family RBPs
Other Glycine max RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma05g09040.1 Glycine max Glyma05g09040.1 N 0.971
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.943
Glyma19g10300.1 Glycine max Glyma19g10300.1 N 0.936
Glyma16g07660.1 Glycine max Glyma16g07660.1 N 0.936
GSVIVG00032402001 Vitis vinifera GSVIVG00032402001 N 0.850
ppa007179m Prunus persica ppa007179m N 0.836
PK13311.1 Cannabis sativa PK13311.1 N 0.829
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.829
29917.m002004 Ricinus communis 29917.m002004 N 0.821
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.814
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.807
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.793
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.793
MDP0000303054 Malus x domestica MDP0000303054 N 0.793
29629.m001425 Ricinus communis 29629.m001425 N 0.793
MDP0000270712 Malus x domestica MDP0000270712 N 0.793
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.786
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.786
mgf016066m Mimulus guttatus mgf016066m N 0.779
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.779
ppa006963m Prunus persica ppa006963m N 0.771
MDP0000202850 Malus x domestica MDP0000202850 N 0.771
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.771
MDP0000191633 Malus x domestica MDP0000191633 N 0.764
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.764
AT5G40490 Arabidopsis thaliana AT5G40490-TAIR-G N 0.757
MDP0000220851 Malus x domestica MDP0000220851 N 0.757
PK22392.1 Cannabis sativa PK22392.1 N 0.757
XM_002870653.1 Arabidopsis lyrata fgenesh2_kg.7__3369__AT5G40490.1 N 0.750
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.750
MDP0000303178 Malus x domestica MDP0000303178 N 0.743
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.736
BRADI3G39090 Brachypodium distachyon BRADI3G39090 N 0.721
PDK_20s1363571g001 Phoenix dactylifera PDK_20s1363571g001 N 0.714
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.707
ppa007812m Prunus persica ppa007812m N 0.700
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.700