Glyma19g10300.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma19g10300.1 T52927_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma19g10300.1 RRM 46 114
Glyma19g10300.1 RRM 136 206

Links

Other RRM family RBPs
Other Glycine max RBPs

35 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma16g07660.1 Glycine max Glyma16g07660.1 N 1.000
Glyma05g09040.1 Glycine max Glyma05g09040.1 N 0.950
Glyma19g00530.1 Glycine max Glyma19g00530.1 N 0.936
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.936
GSVIVG00032402001 Vitis vinifera GSVIVG00032402001 N 0.871
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.857
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.843
29917.m002004 Ricinus communis 29917.m002004 N 0.836
ppa007179m Prunus persica ppa007179m N 0.836
PK13311.1 Cannabis sativa PK13311.1 N 0.829
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.814
MDP0000270712 Malus x domestica MDP0000270712 N 0.800
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.800
MDP0000303054 Malus x domestica MDP0000303054 N 0.800
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.786
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.786
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.786
29629.m001425 Ricinus communis 29629.m001425 N 0.786
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.779
mgf016066m Mimulus guttatus mgf016066m N 0.779
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.771
AT5G40490 Arabidopsis thaliana AT5G40490-TAIR-G N 0.771
MDP0000202850 Malus x domestica MDP0000202850 N 0.764
XM_002870653.1 Arabidopsis lyrata fgenesh2_kg.7__3369__AT5G40490.1 N 0.764
ppa006963m Prunus persica ppa006963m N 0.764
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.764
PK22392.1 Cannabis sativa PK22392.1 N 0.757
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.757
MDP0000191633 Malus x domestica MDP0000191633 N 0.757
MDP0000220851 Malus x domestica MDP0000220851 N 0.750
MDP0000303178 Malus x domestica MDP0000303178 N 0.736
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.721
PDK_20s1363571g001 Phoenix dactylifera PDK_20s1363571g001 N 0.721
BRADI3G39090 Brachypodium distachyon BRADI3G39090 N 0.714
mgf019396m Mimulus guttatus mgf019396m N 0.700