Glyma05g09040.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma05g09040.1 T52661_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma05g09040.1 RRM 44 112
Glyma05g09040.1 RRM 132 202

Links

Other RRM family RBPs
Other Glycine max RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma19g00530.1 Glycine max Glyma19g00530.1 N 0.971
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.964
Glyma16g07660.1 Glycine max Glyma16g07660.1 N 0.950
Glyma19g10300.1 Glycine max Glyma19g10300.1 N 0.950
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.850
GSVIVG00032402001 Vitis vinifera GSVIVG00032402001 N 0.850
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.836
29917.m002004 Ricinus communis 29917.m002004 N 0.829
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.821
ppa007179m Prunus persica ppa007179m N 0.821
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.814
PK13311.1 Cannabis sativa PK13311.1 N 0.814
29629.m001425 Ricinus communis 29629.m001425 N 0.800
MDP0000270712 Malus x domestica MDP0000270712 N 0.793
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.793
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.793
MDP0000303054 Malus x domestica MDP0000303054 N 0.793
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.786
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.786
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.779
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.771
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.771
mgf016066m Mimulus guttatus mgf016066m N 0.771
PK22392.1 Cannabis sativa PK22392.1 N 0.764
ppa006963m Prunus persica ppa006963m N 0.764
MDP0000202850 Malus x domestica MDP0000202850 N 0.764
AT5G40490 Arabidopsis thaliana AT5G40490-TAIR-G N 0.764
MDP0000191633 Malus x domestica MDP0000191633 N 0.757
XM_002870653.1 Arabidopsis lyrata fgenesh2_kg.7__3369__AT5G40490.1 N 0.757
MDP0000220851 Malus x domestica MDP0000220851 N 0.750
PDK_20s1363571g001 Phoenix dactylifera PDK_20s1363571g001 N 0.743
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.743
BRADI3G39090 Brachypodium distachyon BRADI3G39090 N 0.729
MDP0000303178 Malus x domestica MDP0000303178 N 0.729
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.707
GSVIVG00030120001 Vitis vinifera GSVIVG00030120001 N 0.700
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.700
mgf019396m Mimulus guttatus mgf019396m N 0.700