ENSMLUG00000012245 (Myotis lucifugus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMLUG00000012245 T38736_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC1
M146_0.6 		Homo sapiens ARAAAAM RNAcompete
Ray et al.(2013)
RNCMPT00155 		0.778
PABPC1
M349_0.6 		Homo sapiens ACDAAYM SELEX
Cook et al.(2011)
950_7908267 		0.778
PABPC1
M275_0.6 		Homo sapiens AAAAA SELEX
Cook et al.(2011)
24_7908267 		0.778
PABPC3
M144_0.6 		Homo sapiens RAAAACM RNAcompete
Ray et al.(2013)
RNCMPT00153 		0.728
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMLUP00000011161 RRM 1 44
ENSMLUP00000011161 RRM 62 130
ENSMLUP00000011161 RRM 176 223
ENSMLUP00000011161 RRM 257 325

Links

Other RRM family RBPs
Other Myotis lucifugus RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC100056021 Equus caballus ENSECAG00000020699 I 0.853
LOC100413032 Callithrix jacchus ENSCJAG00000015833 I 0.816
ENSACAG00000016470 Anolis carolinensis ENSACAG00000016470 I 0.778
Pabpc1 Rattus norvegicus ENSRNOG00000008639 I 0.778
ENSPVAG00000016640 Pteropus vampyrus ENSPVAG00000016640 I 0.778
ENSSSCG00000006063 Sus scrofa ENSSSCG00000006063 I 0.778
PABPC1 Taeniopygia guttata ENSTGUG00000012067 I 0.778
ENSTTRG00000004689 Tursiops truncatus ENSTTRG00000004689 I 0.778
ENSTSYG00000004229 Tarsius syrichta ENSTSYG00000004229 I 0.778
PABPC1 Macaca mulatta ENSMMUG00000017786 I 0.778
ENSCAFG00000000567 Canis familiaris ENSCAFG00000000567 I 0.778
ENSPPYG00000018790 Pongo pygmaeus ENSPPYG00000018790 I 0.778
ENSLAFG00000013994 Loxodonta africana ENSLAFG00000013994 I 0.778
ENSOCUG00000004354 Oryctolagus cuniculus ENSOCUG00000004354 I 0.778
PABPC1 Homo sapiens ENSG00000070756 D 0.778
Pabpc1 Mus musculus ENSMUSG00000022283 I 0.778
ENSMODG00000012040 Monodelphis domestica ENSMODG00000012040 I 0.778
ENSOCUG00000023935 Oryctolagus cuniculus ENSOCUG00000023935 I 0.778
ENSOANG00000007307 Ornithorhynchus anatinus ENSOANG00000007307 I 0.778
ENSOPRG00000009667 Ochotona princeps ENSOPRG00000009667 I 0.778
XR_023909.1 Pan troglodytes ENSPTRG00000020475 I 0.774
XR_030308.1 Monodelphis domestica ENSMODG00000006222 I 0.771
LOC100411130 Callithrix jacchus ENSCJAG00000018953 I 0.763
Ame_R001741 Ailuropoda melanoleuca Ame_R001741 I 0.756
pabpc1 Xenopus tropicalis ENSXETG00000006635 I 0.753
PABPC3 Gasterosteus aculeatus ENSGACG00000003572 I 0.746
CAA40721 Xenopus laevis CAA40721 I 0.742
pabpc1a Danio rerio ENSDARG00000017219 I 0.742
P20965 Xenopus laevis P20965 I 0.742
AAH52100 Xenopus laevis AAH52100 I 0.742
ENSTRUG00000003767 Takifugu rubripes ENSTRUG00000003767 I 0.742
ENSTNIG00000009153 Tetraodon nigroviridis ENSTNIG00000009153 I 0.742
PABPC3 Oryzias latipes ENSORLG00000002691 I 0.742
PABPC3 Takifugu rubripes ENSTRUG00000011577 I 0.738
Q6IP09 Xenopus laevis Q6IP09 I 0.738
AAI08463 Xenopus laevis AAI08463 I 0.738
AAH72110 Xenopus laevis AAH72110 I 0.738
AAA60936 Xenopus laevis AAA60936 I 0.738
pabpc1b Danio rerio ENSDARG00000021140 I 0.736
PABPC3 Macaca mulatta ENSMMUG00000020835 I 0.735
XM_001367383.1 Monodelphis domestica ENSMODG00000017105 I 0.735
ENSPPYG00000005219 Pongo pygmaeus ENSPPYG00000005219 I 0.735
Pabpc3 Rattus norvegicus ENSRNOG00000017367 I 0.735
ENSGACG00000003771 Gasterosteus aculeatus ENSGACG00000003771 I 0.728
PABPC3 Homo sapiens ENSG00000151846 D 0.728
Pabpc6 Mus musculus ENSMUSG00000046173 I 0.728
Pabpc2 Rattus norvegicus ENSRNOG00000014527 I 0.728
PABPC3 Tetraodon nigroviridis ENSTNIG00000013307 I 0.726
Q2VIP2_PANTR Pan troglodytes ENSPTRG00000022593 I 0.724
ENSORLG00000003008 Oryzias latipes ENSORLG00000003008 I 0.724
Pabpc2 Mus musculus ENSMUSG00000051732 I 0.724
ENSMICG00000009121 Microcebus murinus ENSMICG00000009121 I 0.715
ENSACAG00000002544 Anolis carolinensis ENSACAG00000002544 I 0.714
Q2VIP1_9PRIM Gorilla gorilla ENSGGOG00000006785 I 0.707