mgf009246m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf009246m T53665_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf009246m RRM 93 117
mgf009246m RRM 125 168
mgf009246m RRM 213 283
mgf009246m RRM 361 423

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9H2X2_POPTR Populus trichocarpa POPTR_0004s04100 N 0.775
ppa006486m Prunus persica ppa006486m N 0.771
estExt_Genewise1.C_1000126 Selaginella moellendorfii estExt_Genewise1.C_1000126 N 0.765
chr6.LjT04E21.260.nc Lotus japonicus chr6.LjT04E21.260.nc N 0.755
e_gw1.58.41.1 Physcomitrella patens e_gw1.58.41.1 N 0.752
mgf007385m Mimulus guttatus mgf007385m N 0.751
mgf004253m Mimulus guttatus mgf004253m N 0.751
e_gw1.79.119.1 Physcomitrella patens e_gw1.79.119.1 N 0.748
estExt_gwp_gw1.C_2700027 Physcomitrella patens estExt_gwp_gw1.C_2700027 N 0.744
MDP0000306572 Malus x domestica MDP0000306572 N 0.743
AT1G60900 Arabidopsis thaliana AT1G60900-TAIR-G N 0.741
gw1.88.127.1 Physcomitrella patens gw1.88.127.1 N 0.738
MDP0000194332 Malus x domestica MDP0000194332 N 0.738
Cucsa.365600 Cucumis sativus Cucsa.365600 N 0.738
XM_002888074.1 Arabidopsis lyrata fgenesh2_kg.2__371__AT1G60900.1 N 0.737
MDP0000288579 Malus x domestica MDP0000288579 N 0.735
BRADI4G12260 Brachypodium distachyon BRADI4G12260 N 0.732
GRMZM2G093256 Zea mays GRMZM2G093256 N 0.730
cassava37462.valid.m1 Manihot esculenta cassava37462.valid.m1 N 0.728
cassava37461.valid.m1 Manihot esculenta cassava37461.valid.m1 N 0.728
cassava40783.m1 Manihot esculenta cassava40783.m1 N 0.728
cassava40784.m1 Manihot esculenta cassava40784.m1 N 0.728
cassava40785.m1 Manihot esculenta cassava40785.m1 N 0.728
cassava35938.valid.m1 Manihot esculenta cassava35938.valid.m1 N 0.728
B9MXR1_POPTR Populus trichocarpa POPTR_0005s12700 N 0.728
cassava35937.valid.m1 Manihot esculenta cassava35937.valid.m1 N 0.728
mgf010551m Mimulus guttatus mgf010551m N 0.727
B9HEU4_POPTR Populus trichocarpa POPTR_0007s12550 N 0.723
Medtr4g032540 Medicago truncatula Medtr4g032540 N 0.722
Medtr4g032620 Medicago truncatula Medtr4g032620 N 0.722
GSVIVG00018993001 Vitis vinifera GSVIVG00018993001 N 0.721
LOC_Os11g45590 Oryza sativa LOC_Os11g45590 N 0.721
GRMZM2G022763 Zea mays GRMZM2G022763 N 0.719
e_gw1.98.112.1 Physcomitrella patens e_gw1.98.112.1 N 0.718
Medtr3g013160 Medicago truncatula Medtr3g013160 N 0.716
GRMZM2G057450 Zea mays GRMZM2G057450 N 0.716
SB05G026740 Sorghum bicolor Sb05g026740 N 0.712
BGIOSIBCE008762 Oryza indica BGIOSIBCE008762 N 0.712
BRADI4G09940 Brachypodium distachyon BRADI4G09940 N 0.707
gw1.42.85.1 Selaginella moellendorfii gw1.42.85.1 N 0.707