GRMZM2G093256 (Zea mays)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GRMZM2G093256 T54104_0.6 MaizeSequence (2009-Oct-16)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G093256_P02 RRM 262 285
GRMZM2G093256_P02 RRM 294 337
GRMZM2G093256_P02 RRM 382 452
GRMZM2G093256_P03 RRM 262 285
GRMZM2G093256_P03 RRM 294 337
GRMZM2G093256_P03 RRM 382 452
GRMZM2G093256_P04 RRM 262 285
GRMZM2G093256_P04 RRM 293 337
GRMZM2G093256_P04 RRM 382 452
GRMZM2G093256_P04 RRM 518 579
GRMZM2G093256_P06 RRM 255 278
GRMZM2G093256_P06 RRM 287 330
GRMZM2G093256_P06 RRM 375 445

Links

Other RRM family RBPs
Other Zea mays RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Sb05g025260 Sorghum bicolor Sb05g025260 N 1.000
GRMZM2G022763 Zea mays GRMZM2G022763 N 0.986
BRADI4G12260 Brachypodium distachyon BRADI4G12260 N 0.958
LOC_Os11g41820 Oryza sativa LOC_Os11g41820 N 0.944
GRMZM2G057450 Zea mays GRMZM2G057450 N 0.944
LOC_Os11g45590 Oryza sativa LOC_Os11g45590 N 0.922
BGIOSIBCE008762 Oryza indica BGIOSIBCE008762 N 0.917
BRADI4G09940 Brachypodium distachyon BRADI4G09940 N 0.912
29646.m001075 Ricinus communis 29646.m001075 N 0.908
mgf002992m Mimulus guttatus mgf002992m N 0.908
PK22404.1 Cannabis sativa PK22404.1 N 0.901
SB05G026786 Sorghum bicolor Sb05g026786 N 0.901
BRADI4G38060 Brachypodium distachyon BRADI4G38060 N 0.893
SB05G026740 Sorghum bicolor Sb05g026740 N 0.893
Medtr3g013160 Medicago truncatula Medtr3g013160 N 0.881
ATU2AF65A Arabidopsis thaliana AT4G36690-TAIR-G N 0.874
chr3.CM0129.190.nd Lotus japonicus chr3.CM0129.190.nd N 0.859
MDP0000306572 Malus x domestica MDP0000306572 N 0.854
cassava35937.valid.m1 Manihot esculenta cassava35937.valid.m1 N 0.850
cassava35938.valid.m1 Manihot esculenta cassava35938.valid.m1 N 0.850
MDP0000194332 Malus x domestica MDP0000194332 N 0.849
cassava40783.m1 Manihot esculenta cassava40783.m1 N 0.845
cassava40785.m1 Manihot esculenta cassava40785.m1 N 0.845
cassava40784.m1 Manihot esculenta cassava40784.m1 N 0.845
cassava37462.valid.m1 Manihot esculenta cassava37462.valid.m1 N 0.845
cassava37461.valid.m1 Manihot esculenta cassava37461.valid.m1 N 0.845
Cucsa.365600 Cucumis sativus Cucsa.365600 N 0.844
GSVIVG00007437001 Vitis vinifera GSVIVG00007437001 N 0.843
B9MXR1_POPTR Populus trichocarpa POPTR_0005s12700 N 0.840
XM_002888074.1 Arabidopsis lyrata fgenesh2_kg.2__371__AT1G60900.1 N 0.839
mgf007385m Mimulus guttatus mgf007385m N 0.838
mgf004253m Mimulus guttatus mgf004253m N 0.838
AT1G60900 Arabidopsis thaliana AT1G60900-TAIR-G N 0.834
B9HEU4_POPTR Populus trichocarpa POPTR_0007s12550 N 0.830
Medtr4g032540 Medicago truncatula Medtr4g032540 N 0.829
Medtr4g032620 Medicago truncatula Medtr4g032620 N 0.829
XM_002866951.1 Arabidopsis lyrata fgenesh2_kg.7__398__AT4G36690.1 N 0.825
GSVIVG00018993001 Vitis vinifera GSVIVG00018993001 N 0.819
mgf010551m Mimulus guttatus mgf010551m N 0.810
chr3.CM0129.150.nc Lotus japonicus chr3.CM0129.150.nc N 0.802
Glyma06g48230.1 Glycine max Glyma06g48230.1 N 0.799
Glyma04g43500.1 Glycine max Glyma04g43500.1 N 0.797
BGIOSIBCE035101 Oryza indica BGIOSIBCE035101 N 0.779
e_gw1.58.41.1 Physcomitrella patens e_gw1.58.41.1 N 0.743
e_gw1.79.119.1 Physcomitrella patens e_gw1.79.119.1 N 0.743
estExt_Genewise1.C_1000126 Selaginella moellendorfii estExt_Genewise1.C_1000126 N 0.737
ppa006486m Prunus persica ppa006486m N 0.733
mgf009246m Mimulus guttatus mgf009246m N 0.730
estExt_gwp_gw1.C_2700027 Physcomitrella patens estExt_gwp_gw1.C_2700027 N 0.729
B9H2X2_POPTR Populus trichocarpa POPTR_0004s04100 N 0.727
gw1.88.127.1 Physcomitrella patens gw1.88.127.1 N 0.727
MDP0000288579 Malus x domestica MDP0000288579 N 0.722
SB05G026783 Sorghum bicolor Sb05g026783 N 0.706
gw1.42.85.1 Selaginella moellendorfii gw1.42.85.1 N 0.706