Glyma06g14020.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma06g14020.1 T52679_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma06g14020.1 RRM 18 84

Links

Other RRM family RBPs
Other Glycine max RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma04g40770.1 Glycine max Glyma04g40770.1 I 0.955
Medtr3g122940 Medicago truncatula Medtr3g122940 N 0.841
30076.m004440 Ricinus communis 30076.m004440 I 0.809
PK14266.1 Cannabis sativa PK14266.1 I 0.809
Glyma07g05670.1 Glycine max Glyma07g05670.1 I 0.809
Glyma16g02220.1 Glycine max Glyma16g02220.1 I 0.809
Cucsa.348630 Cucumis sativus Cucsa.348630 I 0.794
B9GRQ8_POPTR Populus trichocarpa POPTR_0002s17990 I 0.794
A9PAJ1_POPTR Populus trichocarpa POPTR_0014s10090 I 0.794
gw1.41.247.1 Selaginella moellendorfii gw1.41.247.1 I 0.794
MDP0000488395 Malus x domestica MDP0000488395 I 0.779
MDP0000548950 Malus x domestica MDP0000548950 I 0.779
MDP0000744398 Malus x domestica MDP0000744398 I 0.779
cassava32990.m1 Manihot esculenta cassava32990.m1 I 0.779
GSVIVG00027434001 Vitis vinifera GSVIVG00027434001 I 0.779
cassava39418.m1 Manihot esculenta cassava39418.m1 I 0.779
LjSGA_018073.2 Lotus japonicus LjSGA_018073.2 I 0.779
Glyma06g01670.1 Glycine max Glyma06g01670.1 I 0.776
Glyma04g01590.1 Glycine max Glyma04g01590.1 I 0.776
ppa018603m Prunus persica ppa018603m I 0.768
ppa016222m Prunus persica ppa016222m I 0.765
A9PDC5_POPTR Populus trichocarpa POPTR_0015s00790 N 0.765
MDP0000138486 Malus x domestica MDP0000138486 I 0.761
CU179634_3 Medicago truncatula CU179634_3 I 0.761
Cucsa.005270 Cucumis sativus Cucsa.005270 I 0.750
PK17691.1 Cannabis sativa PK17691.1 N 0.750
ppa009964m Prunus persica ppa009964m I 0.750
Medtr3g159840 Medicago truncatula Medtr3g159840 I 0.746
PK21213.1 Cannabis sativa PK21213.1 I 0.746
Glyma16g02120.1 Glycine max Glyma16g02120.1 I 0.739
mgf017214m Mimulus guttatus mgf017214m I 0.735
MDP0000857317 Malus x domestica MDP0000857317 I 0.725
AT2G46780 Arabidopsis thaliana AT2G46780-TAIR-G I 0.725
PK15672.1 Cannabis sativa PK15672.1 I 0.725
Glyma07g05590.1 Glycine max Glyma07g05590.1 I 0.725
MDP0000118777 Malus x domestica MDP0000118777 I 0.725
GRMZM2G303915 Zea mays GRMZM2G303915 I 0.721
cassava44391.m1 Manihot esculenta cassava44391.m1 I 0.721
cassava39454.m1 Manihot esculenta cassava39454.m1 I 0.721
MDP0000134468 Malus x domestica MDP0000134468 I 0.721
ppa009716m Prunus persica ppa009716m I 0.721
GSVIVG00009045001 Vitis vinifera GSVIVG00009045001 I 0.721
BGIOSIBCE008410 Oryza indica BGIOSIBCE008410 I 0.721
XM_002889039.1 Arabidopsis lyrata fgenesh2_kg.2__1933__AT1G76460.1 I 0.721
LOC_Os02g48340 Oryza sativa LOC_Os02g48340 I 0.721
AT1G22330 Arabidopsis thaliana AT1G22330-TAIR-G N 0.710
XM_002880217.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4002831 I 0.710
ppa018926m Prunus persica ppa018926m I 0.710
ppa019392m Prunus persica ppa019392m I 0.710
gw1.51.103.1 Physcomitrella patens gw1.51.103.1 I 0.706
Medtr5g073010 Medicago truncatula Medtr5g073010 I 0.706
cassava7423.valid.m1 Manihot esculenta cassava7423.valid.m1 I 0.706
B9GPN6_POPTR Populus trichocarpa POPTR_0002s00610 I 0.706
gw1.126.80.1 Physcomitrella patens gw1.126.80.1 I 0.706
B9H5W4_POPTR Populus trichocarpa POPTR_0005s27810 I 0.706
MDP0000284454 Malus x domestica MDP0000284454 I 0.706
BRADI3G53240 Brachypodium distachyon BRADI3G53240 I 0.701
XM_002890498.1 Arabidopsis lyrata scaffold_102598.1 I 0.701