Sjc_0008080 (Schistosoma japonicum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Sjc_0008080 T54767_0.6 SDSPB (2008-Sep-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000000758 RRM 22 92

Links

Other RRM family RBPs
Other Schistosoma japonicum RBPs

77 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.775
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.761
WUBG_16568 Wuchereria bancrofti WUBG_16568 N 0.761
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.761
LOAG_03270 Loa loa LOAG_03270 N 0.761
Minc02990 Meloidogyne incognita Minc02990 N 0.746
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.746
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.746
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.746
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.746
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.746
Bm1_02935 Brugia malayi Bm1_02935 N 0.746
Minc06129 Meloidogyne incognita Minc06129 N 0.746
91084 Helobdella robusta 91084 N 0.746
Ppa-ncbp-2 Pristionchus pacificus PPA17381 N 0.746
PHUM535920 Pediculus humanus PHUM535920 N 0.746
estExt_gwp.C_920142 Nematostella vectensis estExt_gwp.C_920142 N 0.746
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.732
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.732
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.732
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.732
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.732
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.732
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.732
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.732
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.732
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.732
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.732
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.732
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.732
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.732
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.732
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.732
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.732
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.732
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.732
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.732
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.732
NCBP2 Equus caballus ENSECAG00000016153 N 0.732
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.732
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.732
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.732
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.732
NCBP2 Homo sapiens ENSG00000114503 N 0.732
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.732
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.732
NCBP2 Gallus gallus ENSGALG00000006843 N 0.718
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.718
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.718
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.718
NCBP2 Takifugu rubripes ENSTRUG00000018355 N 0.718
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.718
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.718
XP_002166119.1 Hydra magnipapillata XP_002166119.1 N 0.718
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.718
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.718
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.718
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.718
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.718
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.718
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.718
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.718
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.718
e_gw1.10.746.1 Trichoderma virens e_gw1.10.746.1 N 0.704
e_gw1.17.191.1 Trichoderma reesei e_gw1.17.191.1 N 0.704
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.704
AAH72902 Xenopus laevis AAH72902 N 0.704
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.704
GSTUMT00010626001 Tuber melanosporum GSTUMT00010626001 N 0.704
NCBP2 Tetraodon nigroviridis ENSTNIG00000006065 N 0.704
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.704
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.704
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.704
SS1G_13629 Sclerotinia sclerotiorum SS1G_13629 N 0.704
BC1G_04395 Botrytis cinerea BC1G_04395 N 0.704
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.704
P52299 Xenopus laevis P52299 N 0.704