MDP0000908645 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000908645 T57739_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000908645 RRM 21 89
MDP0000908645 RRM 109 179

Links

Other RRM family RBPs
Other Malus x domestica RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000288646 Malus x domestica MDP0000288646 N 1.000
ppa007812m Prunus persica ppa007812m N 0.886
mgf019396m Mimulus guttatus mgf019396m N 0.800
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.800
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.786
Medtr3g106660 Medicago truncatula Medtr3g106660 N 0.771
MDP0000202850 Malus x domestica MDP0000202850 N 0.757
ppa006963m Prunus persica ppa006963m N 0.757
GSVIVG00030120001 Vitis vinifera GSVIVG00030120001 N 0.750
MDP0000191633 Malus x domestica MDP0000191633 N 0.743
MDP0000220851 Malus x domestica MDP0000220851 N 0.743
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.743
29629.m001425 Ricinus communis 29629.m001425 N 0.743
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.743
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.743
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.743
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.736
PK22392.1 Cannabis sativa PK22392.1 N 0.729
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.729
BGIOSIBCE027406 Oryza indica BGIOSIBCE027406 N 0.716
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.716
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.707