mgf019396m (Mimulus guttatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 mgf019396m T53775_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf019396m RRM 24 92
mgf019396m RRM 112 182

Links

Other RRM family RBPs
Other Mimulus guttatus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.893
ppa007812m Prunus persica ppa007812m N 0.850
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.850
GSVIVG00030120001 Vitis vinifera GSVIVG00030120001 N 0.829
MDP0000220851 Malus x domestica MDP0000220851 N 0.814
MDP0000191633 Malus x domestica MDP0000191633 N 0.814
MDP0000202850 Malus x domestica MDP0000202850 N 0.814
Medtr3g106660 Medicago truncatula Medtr3g106660 N 0.814
ppa006963m Prunus persica ppa006963m N 0.807
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.800
MDP0000288646 Malus x domestica MDP0000288646 N 0.800
MDP0000908645 Malus x domestica MDP0000908645 N 0.800
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.779
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.764
29629.m001425 Ricinus communis 29629.m001425 N 0.764
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.764
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.757
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.757
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.757
PK22392.1 Cannabis sativa PK22392.1 N 0.757
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.743
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.736
BGIOSIBCE027406 Oryza indica BGIOSIBCE027406 N 0.723
LOC_Os08g23120 Oryza sativa LOC_Os08g23120 N 0.723
GRMZM2G050218 Zea mays GRMZM2G050218 N 0.714
mgf016066m Mimulus guttatus mgf016066m N 0.707
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.707
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.707
29917.m002004 Ricinus communis 29917.m002004 N 0.707
Glyma19g10300.1 Glycine max Glyma19g10300.1 N 0.700
Glyma16g07660.1 Glycine max Glyma16g07660.1 N 0.700
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.700
Glyma05g09040.1 Glycine max Glyma05g09040.1 N 0.700