GSVIVG00030120001 (Vitis vinifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 GSVIVG00030120001 T44756_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
GSVIVT00030120001 RRM 20 88
GSVIVT00030120001 RRM 108 178

Links

Other RRM family RBPs
Other Vitis vinifera RBPs

29 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LjSGA_018192.1 Lotus japonicus LjSGA_018192.1 N 0.864
Glyma13g11650.1 Glycine max Glyma13g11650.1 N 0.843
mgf019396m Mimulus guttatus mgf019396m N 0.829
ppa007812m Prunus persica ppa007812m N 0.821
cassava7031.valid.m1 Manihot esculenta cassava7031.valid.m1 N 0.793
MDP0000202850 Malus x domestica MDP0000202850 N 0.786
MDP0000191633 Malus x domestica MDP0000191633 N 0.779
MDP0000220851 Malus x domestica MDP0000220851 N 0.771
Medtr3g106660 Medicago truncatula Medtr3g106660 N 0.771
ppa006963m Prunus persica ppa006963m N 0.764
B9GFZ7_POPTR Populus trichocarpa POPTR_0001s37920 N 0.764
29629.m001425 Ricinus communis 29629.m001425 N 0.757
cassava24310.valid.m1 Manihot esculenta cassava24310.valid.m1 N 0.757
GSVIVG00014729001 Vitis vinifera GSVIVG00014729001 N 0.757
Cucsa.240780 Cucumis sativus Cucsa.240780 N 0.750
MDP0000908645 Malus x domestica MDP0000908645 N 0.750
MDP0000288646 Malus x domestica MDP0000288646 N 0.750
GSVIVG00012784001 Vitis vinifera GSVIVG00012784001 N 0.743
PK22392.1 Cannabis sativa PK22392.1 N 0.736
cassava897.valid.m1 Manihot esculenta cassava897.valid.m1 N 0.721
Cucsa.340040 Cucumis sativus Cucsa.340040 N 0.714
XM_002882764.1 Arabidopsis lyrata fgenesh2_kg.3__1405__AT3G13224.1 N 0.707
AT3G13224 Arabidopsis thaliana AT3G13224-TAIR-G N 0.707
B9GI65_POPTR Populus trichocarpa POPTR_0001s35360 N 0.707
29917.m002004 Ricinus communis 29917.m002004 N 0.700
Glyma05g09040.1 Glycine max Glyma05g09040.1 N 0.700
chr2.LjT32G18.130.nc Lotus japonicus chr2.LjT32G18.130.nc N 0.700
PDK_20s1363571g001 Phoenix dactylifera PDK_20s1363571g001 N 0.700
PK13311.1 Cannabis sativa PK13311.1 N 0.700