ENSTNIG00000012490 (Tetraodon nigroviridis)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 ENSTNIG00000012490 T62151_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000015460 YTH 423 511

Links

Other YTH family RBPs
Other Tetraodon nigroviridis RBPs

135 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.956
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.956
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 0.945
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 0.945
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.945
ythdf1 Danio rerio ENSDARG00000016447 N 0.945
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 0.945
ENSTRUG00000005049 Takifugu rubripes ENSTRUG00000005049 N 0.945
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.901
YTHDF1 Homo sapiens ENSG00000149658 N 0.901
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.901
LOC100060217 Equus caballus ENSECAG00000019475 N 0.901
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.901
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.901
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.901
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.901
AAH60445 Xenopus laevis AAH60445 N 0.901
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.901
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.901
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.901
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.901
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.901
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.901
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.901
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.901
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.901
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.901
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.901
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.901
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.901
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.901
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.901
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.890
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.890
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.890
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.890
YTHDF1 Pteropus vampyrus ENSPVAG00000017568 N 0.890
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.879
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.868
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.868
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.868
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.868
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.857
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.857
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.857
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.857
YTHDF2 Felis catus ENSFCAG00000012446 N 0.857
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.857
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.857
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.857
LOC419583 Gallus gallus ENSGALG00000000959 N 0.857
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.857
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.857
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.857
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.857
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.857
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.857
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.857
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.857
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.857
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.857
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.857
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.857
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.857
YTHDF2 Homo sapiens ENSG00000198492 N 0.857
AAH78013 Xenopus laevis AAH78013 N 0.857
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.857
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.857
yth2 Danio rerio ENSDARG00000014498 N 0.857
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.857
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.857
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.857
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.857
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.857
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.857
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.857
LOC100070667 Equus caballus ENSECAG00000023108 N 0.857
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.857
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.857
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.857
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.857
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 0.846
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.846
AAH81017 Xenopus laevis AAH81017 N 0.846
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 0.846
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 0.846
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 0.846
LOC776373 Gallus gallus ENSGALG00000019473 N 0.846
Q5ZLM1_CHICK Gallus gallus ENSGALG00000015505 N 0.846
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.846
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 0.846
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.846
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.846
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.835
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.835
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.835
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.835
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.835
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.835
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.835
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.835
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.835
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.835
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.835
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.835
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.835
AAH68959 Xenopus laevis AAH68959 N 0.835
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.835
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.835
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.835
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.835
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.835
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.835
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.835
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.835
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.835
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.835
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.835
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.835
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.835
ythdf3 Danio rerio ENSDARG00000057939 N 0.835
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 0.791
XP_001187433.1 Strongylocentrotus purpuratus XP_001187433.1 N 0.791
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.769
estExt_fgenesh1_pm.C_4090006 Capitella teleta estExt_fgenesh1_pm.C_4090006 N 0.769
62837 Helobdella robusta 62837 N 0.758
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.758
ENSCSAVG00000010987 Ciona savignyi ENSCSAVG00000010987 N 0.758
152141 Helobdella robusta 152141 N 0.758
PHUM167190 Pediculus humanus PHUM167190 N 0.736
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.714
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.714
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.714
e_gw.90.29.1 Nematostella vectensis e_gw.90.29.1 N 0.714
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.714