62837 (Helobdella robusta)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 62837 T62299_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
62837 YTH 53 143

Links

Other YTH family RBPs
Other Helobdella robusta RBPs

152 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
152141 Helobdella robusta 152141 N 0.846
estExt_fgenesh1_pm.C_4090006 Capitella teleta estExt_fgenesh1_pm.C_4090006 N 0.813
ENSCSAVG00000010987 Ciona savignyi ENSCSAVG00000010987 N 0.791
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.780
BGIBMGA007551 Bombyx mori BGIBMGA007551 N 0.780
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.780
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.780
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.780
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.769
LOC419583 Gallus gallus ENSGALG00000000959 N 0.769
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.769
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.769
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.769
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.769
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.769
LOC100070667 Equus caballus ENSECAG00000023108 N 0.769
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.769
ythdf1 Danio rerio ENSDARG00000016447 N 0.769
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.769
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.769
YTHDF2 Homo sapiens ENSG00000198492 N 0.769
YTHDF2 Felis catus ENSFCAG00000012446 N 0.769
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 0.769
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.769
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 0.769
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.769
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.769
ENSTRUG00000005049 Takifugu rubripes ENSTRUG00000005049 N 0.769
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.769
PHUM167190 Pediculus humanus PHUM167190 N 0.769
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.769
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.769
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.769
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.769
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.769
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.769
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.769
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.769
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.769
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 0.769
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.769
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.769
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.769
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.769
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.769
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.769
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.769
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.769
AAH68959 Xenopus laevis AAH68959 N 0.758
ENSTNIG00000012490 Tetraodon nigroviridis ENSTNIG00000012490 N 0.758
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.758
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.758
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.758
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.758
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.758
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.758
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.758
yth2 Danio rerio ENSDARG00000014498 N 0.758
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.758
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.747
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.747
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.747
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.747
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.747
AAH60445 Xenopus laevis AAH60445 N 0.747
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.747
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.747
nasonia_NCBI_hmm250744 Nasonia vitripennis nasonia_NCBI_hmm250744 N 0.747
AAH78013 Xenopus laevis AAH78013 N 0.747
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.747
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.747
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.747
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.747
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.747
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.747
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.747
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.747
LOC100060217 Equus caballus ENSECAG00000019475 N 0.747
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.747
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.747
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.747
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.747
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.747
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.747
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.736
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.736
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.736
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.736
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.736
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 0.736
AAH81017 Xenopus laevis AAH81017 N 0.736
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.736
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.736
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.736
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.736
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.736
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.736
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.736
XP_001187433.1 Strongylocentrotus purpuratus XP_001187433.1 N 0.736
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 0.736
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.736
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.736
YTHDF1 Pteropus vampyrus ENSPVAG00000017568 N 0.736
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.736
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.736
LOC776373 Gallus gallus ENSGALG00000019473 N 0.736
Q5ZLM1_CHICK Gallus gallus ENSGALG00000015505 N 0.736
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.736
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.736
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.736
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 0.736
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.736
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.736
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.736
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.736
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.736
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.736
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.736
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.736
YTHDF1 Homo sapiens ENSG00000149658 N 0.736
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 0.736
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 0.736
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.736
ythdf3 Danio rerio ENSDARG00000057939 N 0.736
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.736
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.736
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.736
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.736
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 0.736
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.736
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.736
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.736
amel4_ncbi_hmm12284 Apis mellifera amel4_ncbi_hmm12284 N 0.725
amel4_ncbi_hmm12284 Tribolium castaneum amel4_ncbi_hmm12284 N 0.725
AGAP003817 Anopheles gambiae AGAP003817 N 0.725
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.714
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.714
GM17761 Drosophila sechellia FBgn0172669 N 0.703
GL21952 Drosophila persimilis FBgn0159545 N 0.703
GG12295 Drosophila erecta FBgn0104586 N 0.703
GE10748 Drosophila yakuba FBgn0228591 N 0.703
GD18245 Drosophila simulans FBgn0189779 N 0.703
GK12904 Drosophila willistoni FBgn0214913 N 0.703
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.703
CPIJ011116 Culex quinquefasciatus CPIJ011116 N 0.703
CPIJ011115 Culex quinquefasciatus CPIJ011115 N 0.703
CpipJ_CPIJ011116 Culex pipiens CpipJ_CPIJ011116 N 0.703
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.703
CpipJ_CPIJ011115 Culex pipiens CpipJ_CPIJ011115 N 0.703
GA19581-RA Drosophila pseudoobscura FBgn0079577 N 0.703
CG6422 Drosophila melanogaster FBgn0039261 N 0.703
GF18592 Drosophila ananassae FBgn0095610 N 0.703