ENSCSAVG00000010987 (Ciona savignyi)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 ENSCSAVG00000010987 T61993_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000018695 YTH 414 504
ENSCSAVP00000018696 YTH 462 552
ENSCSAVP00000018697 YTH 364 454
ENSCSAVP00000018698 YTH 392 482

Links

Other YTH family RBPs
Other Ciona savignyi RBPs

153 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.989
yth2 Danio rerio ENSDARG00000014498 N 0.813
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.813
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.802
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.802
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.802
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.802
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.802
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.802
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.802
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.802
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.791
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.791
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.791
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.791
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.791
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.791
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.791
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.791
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.791
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.791
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.791
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.791
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.791
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.791
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.791
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.791
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.791
62837 Helobdella robusta 62837 N 0.791
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.791
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.791
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.791
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.791
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.791
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.791
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.791
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.791
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.791
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.791
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.791
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.791
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.791
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.791
YTHDF2 Felis catus ENSFCAG00000012446 N 0.791
YTHDF1 Homo sapiens ENSG00000149658 N 0.791
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.791
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.791
YTHDF2 Homo sapiens ENSG00000198492 N 0.791
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.791
LOC100060217 Equus caballus ENSECAG00000019475 N 0.791
LOC100070667 Equus caballus ENSECAG00000023108 N 0.791
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.791
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.791
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.791
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.791
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.791
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.791
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.780
LOC419583 Gallus gallus ENSGALG00000000959 N 0.780
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.780
YTHDF1 Pteropus vampyrus ENSPVAG00000017568 N 0.780
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.780
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.780
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 0.780
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.780
ENSTRUG00000005049 Takifugu rubripes ENSTRUG00000005049 N 0.780
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.780
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 0.780
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.780
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.780
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 0.780
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.780
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.780
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.780
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.780
ythdf1 Danio rerio ENSDARG00000016447 N 0.780
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.780
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.769
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.769
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.769
AAH68959 Xenopus laevis AAH68959 N 0.769
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.769
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.769
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 0.769
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.769
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.769
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.769
152141 Helobdella robusta 152141 N 0.769
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.769
ythdf3 Danio rerio ENSDARG00000057939 N 0.769
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.769
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 0.769
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.769
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 0.769
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.769
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.769
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.769
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.769
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.769
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 0.769
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.769
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 0.769
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.769
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.769
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.769
LOC776373 Gallus gallus ENSGALG00000019473 N 0.769
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.769
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.769
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.769
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.769
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.769
Q5ZLM1_CHICK Gallus gallus ENSGALG00000015505 N 0.769
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.769
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.769
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.769
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.769
AAH78013 Xenopus laevis AAH78013 N 0.758
AAH60445 Xenopus laevis AAH60445 N 0.758
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.758
AAH81017 Xenopus laevis AAH81017 N 0.758
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.758
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.758
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.758
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.758
ENSTNIG00000012490 Tetraodon nigroviridis ENSTNIG00000012490 N 0.758
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.758
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 0.747
estExt_fgenesh1_pm.C_4090006 Capitella teleta estExt_fgenesh1_pm.C_4090006 N 0.747
XP_001187433.1 Strongylocentrotus purpuratus XP_001187433.1 N 0.747
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.747
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.736
GD18245 Drosophila simulans FBgn0189779 N 0.725
AGAP003817 Anopheles gambiae AGAP003817 N 0.725
CG6422 Drosophila melanogaster FBgn0039261 N 0.725
PHUM167190 Pediculus humanus PHUM167190 N 0.725
GM17761 Drosophila sechellia FBgn0172669 N 0.725
CPIJ011115 Culex quinquefasciatus CPIJ011115 N 0.714
GA19581-RA Drosophila pseudoobscura FBgn0079577 N 0.714
CpipJ_CPIJ011116 Culex pipiens CpipJ_CPIJ011116 N 0.714
CpipJ_CPIJ011115 Culex pipiens CpipJ_CPIJ011115 N 0.714
BGIBMGA007551 Bombyx mori BGIBMGA007551 N 0.714
GF18592 Drosophila ananassae FBgn0095610 N 0.714
GG12295 Drosophila erecta FBgn0104586 N 0.714
GE10748 Drosophila yakuba FBgn0228591 N 0.714
CPIJ011116 Culex quinquefasciatus CPIJ011116 N 0.714
GK12904 Drosophila willistoni FBgn0214913 N 0.714
GL21952 Drosophila persimilis FBgn0159545 N 0.714
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.703
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.703
AAEL005544 Aedes aegypti AAEL005544 N 0.703
e_gw.90.29.1 Nematostella vectensis e_gw.90.29.1 N 0.703
nasonia_NCBI_hmm250744 Nasonia vitripennis nasonia_NCBI_hmm250744 N 0.703