AAH68959 (Xenopus laevis)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 AAH68959 T62584_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AAH68959 YTH 375 465

Links

Other YTH family RBPs
Other Xenopus laevis RBPs

155 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.978
AAH78013 Xenopus laevis AAH78013 N 0.978
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.945
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.945
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.945
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.945
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.945
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.945
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.945
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.945
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.945
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.945
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.945
YTHDF2 Homo sapiens ENSG00000198492 N 0.945
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.945
YTHDF2 Felis catus ENSFCAG00000012446 N 0.945
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.945
LOC100070667 Equus caballus ENSECAG00000023108 N 0.945
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.945
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.945
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.945
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.945
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.945
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.945
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.945
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.945
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.945
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.945
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.945
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.945
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.945
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.945
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.934
yth2 Danio rerio ENSDARG00000014498 N 0.934
LOC419583 Gallus gallus ENSGALG00000000959 N 0.934
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.934
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.923
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.912
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.912
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.912
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.912
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.901
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.890
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.879
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.879
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.879
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.879
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.879
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.879
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.879
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.879
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.879
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.879
LOC100060217 Equus caballus ENSECAG00000019475 N 0.879
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.879
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.868
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.868
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.868
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 0.868
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.868
ENSTRUG00000005049 Takifugu rubripes ENSTRUG00000005049 N 0.868
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.868
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.868
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.868
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.868
YTHDF1 Pteropus vampyrus ENSPVAG00000017568 N 0.868
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.868
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.868
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.868
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 0.868
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.868
ythdf1 Danio rerio ENSDARG00000016447 N 0.868
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 0.868
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.868
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.868
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.868
AAH60445 Xenopus laevis AAH60445 N 0.868
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.868
YTHDF1 Homo sapiens ENSG00000149658 N 0.868
AAH81017 Xenopus laevis AAH81017 N 0.857
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 0.857
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 0.857
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.857
Q5ZLM1_CHICK Gallus gallus ENSGALG00000015505 N 0.857
LOC776373 Gallus gallus ENSGALG00000019473 N 0.857
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 0.857
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 0.857
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.857
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.857
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 0.857
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.857
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.846
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.846
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.846
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.846
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.846
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.846
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.846
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.846
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.846
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.846
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.846
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.846
ythdf3 Danio rerio ENSDARG00000057939 N 0.846
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.846
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.846
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.846
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.846
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.846
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.846
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.846
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.846
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.846
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.846
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.846
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.846
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.846
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.846
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.846
ENSTNIG00000012490 Tetraodon nigroviridis ENSTNIG00000012490 N 0.835
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.824
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.791
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 0.780
estExt_fgenesh1_pm.C_4090006 Capitella teleta estExt_fgenesh1_pm.C_4090006 N 0.780
XP_001187433.1 Strongylocentrotus purpuratus XP_001187433.1 N 0.780
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.780
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.769
ENSCSAVG00000010987 Ciona savignyi ENSCSAVG00000010987 N 0.769
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.758
62837 Helobdella robusta 62837 N 0.758
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.758
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.758
BGIBMGA007551 Bombyx mori BGIBMGA007551 N 0.758
PHUM167190 Pediculus humanus PHUM167190 N 0.758
CpipJ_CPIJ011115 Culex pipiens CpipJ_CPIJ011115 N 0.747
CpipJ_CPIJ011116 Culex pipiens CpipJ_CPIJ011116 N 0.747
CPIJ011115 Culex quinquefasciatus CPIJ011115 N 0.747
AGAP003817 Anopheles gambiae AGAP003817 N 0.747
nasonia_NCBI_hmm250744 Nasonia vitripennis nasonia_NCBI_hmm250744 N 0.747
CPIJ011116 Culex quinquefasciatus CPIJ011116 N 0.747
amel4_ncbi_hmm12284 Apis mellifera amel4_ncbi_hmm12284 N 0.736
amel4_ncbi_hmm12284 Tribolium castaneum amel4_ncbi_hmm12284 N 0.736
e_gw.90.29.1 Nematostella vectensis e_gw.90.29.1 N 0.736
152141 Helobdella robusta 152141 N 0.736
AAEL005544 Aedes aegypti AAEL005544 N 0.725
GK12904 Drosophila willistoni FBgn0214913 N 0.725
GD18245 Drosophila simulans FBgn0189779 N 0.714
GM17761 Drosophila sechellia FBgn0172669 N 0.714
CG6422 Drosophila melanogaster FBgn0039261 N 0.714
GF18592 Drosophila ananassae FBgn0095610 N 0.714
GG12295 Drosophila erecta FBgn0104586 N 0.714
PGTG_07186 Puccinia graminis PGTG_07186 N 0.707
Sjc_0086280 Schistosoma japonicum Sjc_0086280 N 0.703
GE10748 Drosophila yakuba FBgn0228591 N 0.703
GL21952 Drosophila persimilis FBgn0159545 N 0.703