estExt_fgenesh1_pm.C_4090006 (Capitella teleta)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 estExt_fgenesh1_pm.C_4090006 T62370_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_4090006 YTH 53 143

Links

Other YTH family RBPs
Other Capitella teleta RBPs

158 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIBMGA007551 Bombyx mori BGIBMGA007551 N 0.868
152141 Helobdella robusta 152141 N 0.857
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.846
amel4_ncbi_hmm12284 Tribolium castaneum amel4_ncbi_hmm12284 N 0.835
amel4_ncbi_hmm12284 Apis mellifera amel4_ncbi_hmm12284 N 0.835
PHUM167190 Pediculus humanus PHUM167190 N 0.835
nasonia_NCBI_hmm250744 Nasonia vitripennis nasonia_NCBI_hmm250744 N 0.835
GK12904 Drosophila willistoni FBgn0214913 N 0.824
GA19581-RA Drosophila pseudoobscura FBgn0079577 N 0.813
GF18592 Drosophila ananassae FBgn0095610 N 0.813
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.813
CG6422 Drosophila melanogaster FBgn0039261 N 0.813
GE10748 Drosophila yakuba FBgn0228591 N 0.813
62837 Helobdella robusta 62837 N 0.813
GG12295 Drosophila erecta FBgn0104586 N 0.813
GM17761 Drosophila sechellia FBgn0172669 N 0.813
GD18245 Drosophila simulans FBgn0189779 N 0.813
GL21952 Drosophila persimilis FBgn0159545 N 0.813
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.802
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.802
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.802
LOC419583 Gallus gallus ENSGALG00000000959 N 0.802
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.802
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.802
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.802
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.802
LOC100070667 Equus caballus ENSECAG00000023108 N 0.802
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.802
YTHDF2 Felis catus ENSFCAG00000012446 N 0.802
YTHDF2 Homo sapiens ENSG00000198492 N 0.802
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.802
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.802
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.802
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.802
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.802
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.802
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.802
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.802
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.802
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.802
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.802
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.802
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.802
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.802
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.802
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.802
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.802
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.802
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.802
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.802
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.802
AGAP003817 Anopheles gambiae AGAP003817 N 0.802
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.791
CPIJ011115 Culex quinquefasciatus CPIJ011115 N 0.791
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.791
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.791
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.791
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.791
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.791
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.791
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.791
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.791
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.791
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.791
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.791
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.791
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.791
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.791
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.791
CPIJ011116 Culex quinquefasciatus CPIJ011116 N 0.791
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.791
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.791
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.791
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.791
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.791
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.791
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.791
CpipJ_CPIJ011115 Culex pipiens CpipJ_CPIJ011115 N 0.791
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.791
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.791
GJ14120 Drosophila virilis FBgn0201338 N 0.791
ythdf3 Danio rerio ENSDARG00000057939 N 0.791
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.791
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.791
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.791
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.791
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.791
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.791
CpipJ_CPIJ011116 Culex pipiens CpipJ_CPIJ011116 N 0.791
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.791
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.791
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.791
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.791
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.780
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 0.780
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.780
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.780
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.780
ENSTRUG00000005049 Takifugu rubripes ENSTRUG00000005049 N 0.780
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.780
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.780
AAH68959 Xenopus laevis AAH68959 N 0.780
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.780
GH22368 Drosophila grimshawi FBgn0129826 N 0.780
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 0.780
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 0.780
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 0.780
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 0.780
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.780
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 0.780
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.780
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.780
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.780
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.780
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.780
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.780
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.780
Q5ZLM1_CHICK Gallus gallus ENSGALG00000015505 N 0.780
LOC776373 Gallus gallus ENSGALG00000019473 N 0.780
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.780
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.780
LOC100060217 Equus caballus ENSECAG00000019475 N 0.780
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.780
ythdf1 Danio rerio ENSDARG00000016447 N 0.780
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 0.780
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.780
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.780
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.780
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.780
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.780
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.780
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 0.780
yth2 Danio rerio ENSDARG00000014498 N 0.769
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.769
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.769
AAH81017 Xenopus laevis AAH81017 N 0.769
YTHDF1 Homo sapiens ENSG00000149658 N 0.769
AAH78013 Xenopus laevis AAH78013 N 0.769
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.769
AAEL005544 Aedes aegypti AAEL005544 N 0.769
YTHDF1 Pteropus vampyrus ENSPVAG00000017568 N 0.769
ENSTNIG00000012490 Tetraodon nigroviridis ENSTNIG00000012490 N 0.769
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.769
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.769
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.769
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.758
AAH60445 Xenopus laevis AAH60445 N 0.758
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.758
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.758
ENSCSAVG00000010987 Ciona savignyi ENSCSAVG00000010987 N 0.747
e_gw.90.29.1 Nematostella vectensis e_gw.90.29.1 N 0.747
XP_001187433.1 Strongylocentrotus purpuratus XP_001187433.1 N 0.747
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 0.747
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.736
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.736
Smp_040460 Schistosoma mansoni Smp_040460 N 0.736
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.736
Sjc_0086280 Schistosoma japonicum Sjc_0086280 N 0.725