ENSTRUG00000005049 (Takifugu rubripes)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 ENSTRUG00000005049 T62156_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000012113 YTH 459 549
ENSTRUP00000012114 YTH 459 549
ENSTRUP00000012115 YTH 481 571

Links

Other YTH family RBPs
Other Takifugu rubripes RBPs

143 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ythdf1 Danio rerio ENSDARG00000016447 N 1.000
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 1.000
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 1.000
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 1.000
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.978
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.978
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.967
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.945
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.945
AAH60445 Xenopus laevis AAH60445 N 0.945
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.945
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.945
ENSTNIG00000012490 Tetraodon nigroviridis ENSTNIG00000012490 N 0.945
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.945
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.934
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.934
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.934
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.934
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.934
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.934
LOC100060217 Equus caballus ENSECAG00000019475 N 0.934
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.934
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.934
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.934
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.934
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.934
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.934
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.923
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.923
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.923
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.923
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.923
YTHDF1 Homo sapiens ENSG00000149658 N 0.923
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.923
YTHDF1 Pteropus vampyrus ENSPVAG00000017568 N 0.923
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.923
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.923
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.912
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.901
LOC419583 Gallus gallus ENSGALG00000000959 N 0.901
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.901
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.901
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.901
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.901
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.901
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.901
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.901
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.901
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.890
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.890
YTHDF2 Felis catus ENSFCAG00000012446 N 0.890
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.890
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.890
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 0.890
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 0.890
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 0.890
Q5ZLM1_CHICK Gallus gallus ENSGALG00000015505 N 0.890
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.890
LOC776373 Gallus gallus ENSGALG00000019473 N 0.890
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.890
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.890
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.890
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.890
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.890
YTHDF2 Homo sapiens ENSG00000198492 N 0.890
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.890
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.890
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.890
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.890
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.890
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.890
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 0.890
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.890
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.890
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.890
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.890
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.890
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.890
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 0.890
AAH78013 Xenopus laevis AAH78013 N 0.890
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.890
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.890
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.890
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.890
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.890
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.890
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.890
LOC100070667 Equus caballus ENSECAG00000023108 N 0.890
yth2 Danio rerio ENSDARG00000014498 N 0.890
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.890
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.890
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.879
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.879
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.879
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.879
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.879
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.879
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.879
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.879
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.879
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.879
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.879
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.879
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.879
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.879
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.879
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.879
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.879
AAH81017 Xenopus laevis AAH81017 N 0.879
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.879
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.879
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.879
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.879
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.879
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.879
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.879
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.879
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.879
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.879
ythdf3 Danio rerio ENSDARG00000057939 N 0.879
AAH68959 Xenopus laevis AAH68959 N 0.868
XP_001187433.1 Strongylocentrotus purpuratus XP_001187433.1 N 0.813
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 0.813
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.791
ENSCSAVG00000010987 Ciona savignyi ENSCSAVG00000010987 N 0.780
estExt_fgenesh1_pm.C_4090006 Capitella teleta estExt_fgenesh1_pm.C_4090006 N 0.780
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.780
152141 Helobdella robusta 152141 N 0.769
62837 Helobdella robusta 62837 N 0.769
PHUM167190 Pediculus humanus PHUM167190 N 0.747
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.736
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.736
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.736
e_gw.90.29.1 Nematostella vectensis e_gw.90.29.1 N 0.736
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.736
Smp_040460 Schistosoma mansoni Smp_040460 N 0.725
amel4_ncbi_hmm12284 Apis mellifera amel4_ncbi_hmm12284 N 0.714
Sjc_0086280 Schistosoma japonicum Sjc_0086280 N 0.714
amel4_ncbi_hmm12284 Tribolium castaneum amel4_ncbi_hmm12284 N 0.714
BGIBMGA007551 Bombyx mori BGIBMGA007551 N 0.703
GL21952 Drosophila persimilis FBgn0159545 N 0.703
GA19581-RA Drosophila pseudoobscura FBgn0079577 N 0.703