CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMPUG00000004937
(
Mustela putorius furo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRMs_3D)
IPR000504
ENSMPUG00000004937
T083284_2.00
Ensembl (2018-Dec-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
JPLE
e-dist
ENSMPUG00000004937
M17266_2.00
Mustela putorius furo
NGURGUKK
JPLE
Sasse et al.(2025)
RM_Mus.put_ENSMPUG00000004937
0.055
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
NONO
M00507_2.00
Homo sapiens
Sequence logo not available
GAGAGGAAC
SELEX
Cook et al.(2011)
1.000
NONO
M00505_2.00
Homo sapiens
AGGGA
SELEX
Cook et al.(2011)
1.000
SFPQ
M00809_2.00
Homo sapiens
UAGUG
RNA-Bind-n-Seq
Dominguez et al.(2018)
0.730
SFPQ
M00808_2.00
Homo sapiens
WGUAAN
RNA-Bind-n-Seq
Dominguez et al.(2018)
0.730
SFPQ
M00506_2.00
Homo sapiens
Sequence logo not available
UGGAGAGGAAC
SELEX
Cook et al.(2011)
0.730
SFPQ
M00190_2.00
Homo sapiens
KURRUKK
RNAcompete
Ray et al.(2013)
0.730
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
Motifs from training set RBPs that strongly contributed to the reconstructed motif
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
e-dist (%
contribution)
SFPQ
M00190_2.00
Homo sapiens
KURRUKK
RNAcompete
Ray et al.(2013)
RNCMPT00177
0.055
(90.91%)
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMPUP00000004898
RRM
70
146
TQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHS
ENSMPUP00000004898
RRM
144
212
CHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSF
RNA contacting residues
Links
Other
RRM
family RBPs
Other
Mustela putorius furo
RBPs
120 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSAMEG00000004776
Ailuropoda melanoleuca
ENSAMEG00000004776
I
0.000
ENSMEUG00000009611
Macropus eugenii
ENSMEUG00000009611
I
0.000
ENSMPUG00000006511
Mustela putorius furo
ENSMPUG00000006511
I
0.000
ENSNLEG00000012307
Nomascus leucogenys
ENSNLEG00000012307
I
0.000
ENSOARG00000002547
Ovis aries
ENSOARG00000002547
I
0.000
ENSP00000223073
Macaca fascicularis
ENSP00000223073
I
0.000
ENSP00000223073-D1
Bos grunniens
ENSP00000223073-D1
I
0.000
ENSPANG00000022295
Papio anubis
ENSPANG00000022295
I
0.000
ENSPPYG00000017975
Pongo abelii
ENSPPYG00000017975
I
0.000
ENSSHAG00000017017
Sarcophilus harrisii
ENSSHAG00000017017
I
0.000
ENSSTOG00000002169
Ictidomys tridecemlineatus
ENSSTOG00000002169
I
0.000
ENSTSYG00000002892
Tarsius syrichta
ENSTSYG00000002892
I
0.000
Myotis_brandtii_RBM28_10012817
Myotis brandtii
Myotis_brandtii_RBM28_10012817
I
0.000
RBM28
Tursiops truncatus
ENSTTRG00000013647
I
0.000
RBM28
Sorex araneus
ENSSARG00000008303
I
0.000
Rbm28
Rattus norvegicus
ENSRNOG00000005468
I
0.000
RBM28
Pan troglodytes
ENSPTRG00000019659
I
0.000
RBM28
Oryctolagus cuniculus
ENSOCUG00000003009
I
0.000
rbm28
Xenopus tropicalis
XB-GENE-919947
I
0.000
Rbm28
Mus musculus
ENSMUSG00000029701
I
0.000
RBM28
Monodelphis domestica
ENSMODG00000015151
I
0.000
RBM28
Myotis lucifugus
ENSMLUG00000002186
I
0.000
RBM28
Microcebus murinus
ENSMICG00000000107
I
0.000
RBM28
Loxodonta africana
ENSLAFG00000010717
I
0.000
RBM28
Gorilla gorilla
ENSGGOG00000004644
I
0.000
RBM28
Homo sapiens
ENSG00000106344
D
0.000
RBM28
Felis catus
ENSFCAG00000000946
I
0.000
RBM28
Echinops telfairi
ENSETEG00000007130
I
0.000
RBM28
Erinaceus europaeus
ENSEEUG00000002389
I
0.000
RBM28
Equus caballus
ENSECAG00000007745
I
0.000
RBM28
Dasypus novemcinctus
ENSDNOG00000001124
I
0.000
RBM28
Cavia porcellus
ENSCPOG00000006253
I
0.000
RBM28
Callithrix jacchus
ENSCJAG00000017731
I
0.000
RBM28
Canis familiaris
ENSCAFG00000001667
I
0.000
RBM28
Bos taurus
ENSBTAG00000017001
I
0.000