s_462797 (Phytophthora sojae)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 s_462797 T14851_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
s_462797 CCHC ZF 229 246

Links

Other CCHC ZF family RBPs
Other Phytophthora sojae RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL005046 Aedes aegypti AAEL005046 N 0.000
AAH73374 Xenopus laevis AAH73374 N 0.000
AAH75146 Xenopus laevis AAH75146 N 0.000
AAH77813 Xenopus laevis AAH77813 N 0.000
AGAP008433 Anopheles gambiae AGAP008433 N 0.000
amel4_ncbi_hmm11379 Apis mellifera amel4_ncbi_hmm11379 N 0.000
Ame_R004270 Ailuropoda melanoleuca Ame_R004270 N 0.000
Ame_R014613 Ailuropoda melanoleuca Ame_R014613 N 0.000
BGIBMGA006208 Bombyx mori BGIBMGA006208 N 0.000
CPIJ014704 Culex quinquefasciatus CPIJ014704 N 0.000
CPIJ019416 Culex quinquefasciatus CPIJ019416 N 0.000
CpipJ_CPIJ014704 Culex pipiens CpipJ_CPIJ014704 N 0.000
CpipJ_CPIJ019416 Culex pipiens CpipJ_CPIJ019416 N 0.000
DGIL_AUG5s7518g10t1 Acyrtosiphon pisum DGIL_AUG5s7518g10t1 N 0.000
RBM23 Anolis carolinensis ENSACAG00000001569 N 0.000
RBM39 Anolis carolinensis ENSACAG00000006436 N 0.000
Q2HJD8_BOVIN Bos taurus ENSBTAG00000003949 N 0.000
Q0IIK8_BOVIN Bos taurus ENSBTAG00000038333 N 0.000
RBM39 Canis familiaris ENSCAFG00000008327 N 0.000
RBM23 Canis familiaris ENSCAFG00000011217 N 0.000
RBM23 Choloepus hoffmanni ENSCHOG00000004460 N 0.000
RBM23 Callithrix jacchus ENSCJAG00000008482 N 0.000
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.000
RBM39 Cavia porcellus ENSCPOG00000014625 N 0.000
ENSCPOG00000021775 Cavia porcellus ENSCPOG00000021775 N 0.000
rbm39a Danio rerio ENSDARG00000011613 N 0.000
rbm39b Danio rerio ENSDARG00000041853 N 0.000
RBM39 Dasypus novemcinctus ENSDNOG00000025219 N 0.000
ENSDORG00000004926 Dipodomys ordii ENSDORG00000004926 N 0.000
LOC100052786 Equus caballus ENSECAG00000009910 N 0.000
RBM39 Equus caballus ENSECAG00000013423 N 0.000
RBM39 Erinaceus europaeus ENSEEUG00000004390 N 0.000
RBM23 Erinaceus europaeus ENSEEUG00000015560 N 0.000
RBM39 Echinops telfairi ENSETEG00000016295 N 0.000
RBM23 Felis catus ENSFCAG00000006632 N 0.000
RBM23 Homo sapiens ENSG00000100461 N 0.000
RBM39 Homo sapiens ENSG00000131051 N 0.000
RBM23 Gasterosteus aculeatus ENSGACG00000002797 N 0.000
RBM23 Gasterosteus aculeatus ENSGACG00000003376 N 0.000
RBM39 Gallus gallus ENSGALG00000001550 N 0.000
RBM39 Gorilla gorilla ENSGGOG00000003950 N 0.000
RBM23 Gorilla gorilla ENSGGOG00000015707 N 0.000
RBM39 Loxodonta africana ENSLAFG00000010346 N 0.000
RBM23 Loxodonta africana ENSLAFG00000018567 N 0.000
RBM39 Meleagris gallopavo ENSMGAG00000001509 N 0.000
RBM39 Microcebus murinus ENSMICG00000001668 N 0.000
RBM23 Microcebus murinus ENSMICG00000006364 N 0.000
RBM23 Myotis lucifugus ENSMLUG00000012923 N 0.000
LOC710066 Macaca mulatta ENSMMUG00000018381 N 0.000
RBM39 Monodelphis domestica ENSMODG00000001557 N 0.000
RBM23 Monodelphis domestica ENSMODG00000024448 N 0.000
Rbm39 Mus musculus ENSMUSG00000027620 N 0.000
RBM23 Oryctolagus cuniculus ENSOCUG00000002006 N 0.000
B7NZJ5_RABIT Oryctolagus cuniculus ENSOCUG00000007050 N 0.000
RBM39 Otolemur garnettii ENSOGAG00000011227 N 0.000
RBM23 Otolemur garnettii ENSOGAG00000014794 N 0.000
RBM23 Ochotona princeps ENSOPRG00000001092 N 0.000
RBM39 Ochotona princeps ENSOPRG00000002183 N 0.000
RBM23 Oryzias latipes ENSORLG00000009919 N 0.000
RBM23 Oryzias latipes ENSORLG00000010370 N 0.000
RBM39 Procavia capensis ENSPCAG00000008764 N 0.000
ENSPPYG00000005649 Pongo pygmaeus ENSPPYG00000005649 N 0.000
ENSPPYG00000010963 Pongo pygmaeus ENSPPYG00000010963 N 0.000
RBM23 Pan troglodytes ENSPTRG00000006151 N 0.000
RBM39 Pan troglodytes ENSPTRG00000013449 N 0.000
RBM23 Pteropus vampyrus ENSPVAG00000013785 N 0.000
RBM39 Pteropus vampyrus ENSPVAG00000014944 N 0.000
Rbm39 Rattus norvegicus ENSRNOG00000019848 N 0.000
RBM23 Sorex araneus ENSSARG00000005165 N 0.000
RBM39 Sorex araneus ENSSARG00000007673 N 0.000
RBM39 Sus scrofa ENSSSCG00000007309 N 0.000
RBM23 Spermophilus tridecemlineatus ENSSTOG00000010354 N 0.000
RBM23 Tupaia belangeri ENSTBEG00000011543 N 0.000
RBM39 Tupaia belangeri ENSTBEG00000017320 N 0.000
RBM39 Taeniopygia guttata ENSTGUG00000003048 N 0.000
RBM23 Tetraodon nigroviridis ENSTNIG00000005223 N 0.000
RBM23 Tetraodon nigroviridis ENSTNIG00000017904 N 0.000
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.000
RBM39 Tarsius syrichta ENSTSYG00000005605 N 0.000
RBM23 Tarsius syrichta ENSTSYG00000014755 N 0.000
RBM23 Tursiops truncatus ENSTTRG00000001500 N 0.000
RBM39 Tursiops truncatus ENSTTRG00000017039 N 0.000
RBM23 Vicugna pacos ENSVPAG00000000599 N 0.000
RBM39 Vicugna pacos ENSVPAG00000003819 N 0.000
rbm39 Xenopus tropicalis ENSXETG00000007434 N 0.000
rbm23 Xenopus tropicalis ENSXETG00000022623 N 0.000
estExt_Genewise1.C_sca_90322 Lottia gigantea estExt_Genewise1.C_sca_90322 N 0.000
estExt_Genewise1Plus.C_150014 Daphnia pulex estExt_Genewise1Plus.C_150014 N 0.000
e_gw.57.85.1 Branchiostoma floridae e_gw.57.85.1 N 0.000
CG11266 Drosophila melanogaster FBgn0031883 N 0.000
GA10876-RA Drosophila pseudoobscura FBgn0070932 N 0.000
GF14957 Drosophila ananassae FBgn0091982 N 0.000
GG10454 Drosophila erecta FBgn0102763 N 0.000
GH13506 Drosophila grimshawi FBgn0120982 N 0.000
GI10246 Drosophila mojavensis FBgn0133011 N 0.000
GM16278 Drosophila sechellia FBgn0171194 N 0.000
GD23448 Drosophila simulans FBgn0194830 N 0.000
GJ18017 Drosophila virilis FBgn0205182 N 0.000
GK15272 Drosophila willistoni FBgn0217277 N 0.000
GE14328 Drosophila yakuba FBgn0231943 N 0.000
fgenesh1_pg.scaffold_245000036 Nematostella vectensis fgenesh1_pg.scaffold_245000036 N 0.000
PHUM394230 Pediculus humanus PHUM394230 N 0.000