Q5ZKT4_CHICK (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000009484 T37682_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.752
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.752
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000015427 RRM 6 67
ENSGALP00000015427 RRM 107 172
ENSGALP00000037225 RRM 6 68
ENSGALP00000037225 RRM 106 154

Links

Other RRM family RBPs
Other Gallus gallus RBPs

114 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava22174.valid.m1 Manihot esculenta cassava22174.valid.m1 N 0.000
ENSCING00000003248 Ciona intestinalis ENSCING00000003248 N 0.000
LOC100062520 Equus caballus ENSECAG00000004701 N 0.000
ENSMEUG00000014025 Macropus eugenii ENSMEUG00000014025 N 0.000
ENSMGAG00000004139 Meleagris gallopavo ENSMGAG00000004139 N 0.000
Cstf2 Mus musculus ENSMUSG00000031256 N 0.000
CSTF2 Ochotona princeps ENSOPRG00000003106 N 0.000
CSTF2 Spermophilus tridecemlineatus ENSSTOG00000001797 N 0.000