Tia1 (Rattus norvegicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSRNOG00000016813 T41110_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.990
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.990
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000023102 RRM 9 77
ENSRNOP00000023102 RRM 97 167
ENSRNOP00000023102 RRM 205 269
ENSRNOP00000023323 RRM 5 73
ENSRNOP00000023323 RRM 93 163
ENSRNOP00000023323 RRM 201 246
ENSRNOP00000047339 RRM 5 73
ENSRNOP00000047339 RRM 104 174
ENSRNOP00000047339 RRM 212 276

Links

Other RRM family RBPs
Other Rattus norvegicus RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH77169 Xenopus laevis AAH77169 I 0.927
AAH80105 Xenopus laevis AAH80105 I 0.941
Ame_R002705 Ailuropoda melanoleuca Ame_R002705 I 0.980
CAC95018 Xenopus laevis CAC95018 I 0.927
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.985
TIAL1 Anolis carolinensis ENSACAG00000016986 I 0.878
A1A4R7_BOVIN Bos taurus ENSBTAG00000004080 I 0.893
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.985
TIA1 Canis familiaris ENSCAFG00000003341 I 0.980
TIAL1 Canis familiaris ENSCAFG00000012171 I 0.824
TIA1 Callithrix jacchus ENSCJAG00000019278 I 0.990
TIAL1 Callithrix jacchus ENSCJAG00000019682 I 0.824
TIA1 Cavia porcellus ENSCPOG00000008327 I 0.990
tial1 Danio rerio ENSDARG00000009525 I 0.888
tia1l Danio rerio ENSDARG00000026476 I 0.859
tia1 Danio rerio ENSDARG00000052536 I 0.927
TIAL1 Dasypus novemcinctus ENSDNOG00000009552 I 0.734
TIA1 Dasypus novemcinctus ENSDNOG00000016356 I 0.980
Tia1 Dipodomys ordii ENSDORG00000008601 I 0.927
Tial1 Dipodomys ordii ENSDORG00000010683 I 0.784
TIAL1 Equus caballus ENSECAG00000009970 I 0.893
TIA1 Echinops telfairi ENSETEG00000010021 I 0.990
TIA1 Homo sapiens ENSG00000116001 D 0.995
TIAL1 Homo sapiens ENSG00000151923 D 0.893
TIAL1 Gasterosteus aculeatus ENSGACG00000003365 I 0.859
TIA1 Gasterosteus aculeatus ENSGACG00000013294 I 0.868
TIA1 Gasterosteus aculeatus ENSGACG00000015800 I 0.898
Q800W1_CHICK Gallus gallus ENSGALG00000009427 I 0.824
Q800W4_CHICK Gallus gallus ENSGALG00000013879 I 0.980
TIAL1 Gorilla gorilla ENSGGOG00000001816 I 0.706
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.985
TIAL1 Macropus eugenii ENSMEUG00000013120 N 0.000
TIA1 Meleagris gallopavo ENSMGAG00000003493 I 0.976
TIA1 Macaca mulatta ENSMMUG00000001126 I 0.990
TIAL1 Macaca mulatta ENSMMUG00000001472 I 0.893
TIAL1 Monodelphis domestica ENSMODG00000008865 I 0.824
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.985
Tial1 Mus musculus ENSMUSG00000030846 I 0.893
Tia1 Mus musculus ENSMUSG00000071337 I 0.995
TIAL1 Ornithorhynchus anatinus ENSOANG00000004896 I 0.756
TIAL1 Oryctolagus cuniculus ENSOCUG00000003783 I 0.888
TIA1 Oryctolagus cuniculus ENSOCUG00000011204 I 0.990
TIA1 Otolemur garnettii ENSOGAG00000010572 I 0.990
TIAL1 Ochotona princeps ENSOPRG00000016546 I 0.768
TIA1 Oryzias latipes ENSORLG00000002529 I 0.898
TIAL1 Oryzias latipes ENSORLG00000013798 I 0.834
TIA1 Oryzias latipes ENSORLG00000015642 I 0.917
TIAL1 Procavia capensis ENSPCAG00000003192 I 0.820
ENSPPYG00000002703 Pongo pygmaeus ENSPPYG00000002703 I 0.824
ENSPPYG00000012326 Pongo pygmaeus ENSPPYG00000012326 I 0.976
TIAL1 Pan troglodytes ENSPTRG00000002996 I 0.824
TIA1 Pan troglodytes ENSPTRG00000023495 I 0.990
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.980
TIAL1 Pteropus vampyrus ENSPVAG00000017585 I 0.820
Tial1 Rattus norvegicus ENSRNOG00000020271 I 0.824
ENSSSCG00000010685 Sus scrofa ENSSSCG00000010685 I 0.893
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.888
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.946
TIA1 Tetraodon nigroviridis ENSTNIG00000011433 I 0.917
TIA1 Tetraodon nigroviridis ENSTNIG00000013470 I 0.898
TIA1 Takifugu rubripes ENSTRUG00000005456 I 0.898
TIA1 Takifugu rubripes ENSTRUG00000015136 I 0.917
TIAL1 Takifugu rubripes ENSTRUG00000017931 I 0.773
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.980
TIAL1 Tursiops truncatus ENSTTRG00000014574 I 0.710
TIAL1 Vicugna pacos ENSVPAG00000001240 I 0.795
tia1 Xenopus tropicalis ENSXETG00000008514 I 0.946
estExt_fgenesh2_pg.C_1430023 Branchiostoma floridae estExt_fgenesh2_pg.C_1430023 I 0.785
gw.406.24.1 Branchiostoma floridae gw.406.24.1 I 0.780