XP_001187788.1 (Strongylocentrotus purpuratus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 XP_001187788.1 T58914_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001187788.1 RRM 36 106

Links

Other RRM family RBPs
Other Strongylocentrotus purpuratus RBPs

101 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
2118330B Xenopus laevis 2118330B N 0.704
91084 Helobdella robusta 91084 N 0.704
NCBP2_AEDAE Aedes aegypti AAEL006135 N 0.746
AAH72902 Xenopus laevis AAH72902 N 0.704
NCBP2_ANOGA Anopheles gambiae AGAP002547 N 0.704
amel4_ncbi_hmm3188 Apis mellifera amel4_ncbi_hmm3188 N 0.789
Ame_R004608 Ailuropoda melanoleuca Ame_R004608 N 0.746
BGIBMGA007585 Bombyx mori BGIBMGA007585 N 0.803
CAA59259 Xenopus laevis CAA59259 N 0.704
CAOG_06930 Capsaspora owczarzaki CAOG_06930 N 0.732
NCBP2_CULQU Culex quinquefasciatus CPIJ003555 N 0.732
CpipJ_CPIJ003555 Culex pipiens CpipJ_CPIJ003555 N 0.732
DGIL_AUG5s12516g4t1 Acyrtosiphon pisum DGIL_AUG5s12516g4t1 N 0.789
DGIL_AUG5s15103g4t1 Acyrtosiphon pisum DGIL_AUG5s15103g4t1 N 0.775
ENSACAG00000015128 Anolis carolinensis ENSACAG00000015128 N 0.761
NCBP2_BOVIN Bos taurus ENSBTAG00000008873 N 0.746
NCBP2 Canis familiaris ENSCAFG00000013100 N 0.746
ENSCHOG00000005967 Choloepus hoffmanni ENSCHOG00000005967 N 0.732
ENSCING00000003079 Ciona intestinalis ENSCING00000003079 N 0.732
ENSCING00000016926 Ciona intestinalis ENSCING00000016926 N 0.732
LOC100404338 Callithrix jacchus ENSCJAG00000013735 N 0.746
NCBP2 Cavia porcellus ENSCPOG00000002976 N 0.732
ENSCSAVG00000005823 Ciona savignyi ENSCSAVG00000005823 N 0.746
ncbp2 Danio rerio ENSDARG00000014898 N 0.718
NCBP2 Equus caballus ENSECAG00000016153 N 0.746
NCBP2 Homo sapiens ENSG00000114503 N 0.746
NCBP2_CHICK Gallus gallus ENSGALG00000005753 N 0.746
NCBP2 Gallus gallus ENSGALG00000006843 N 0.718
NCBP2 Loxodonta africana ENSLAFG00000006372 N 0.746
NCBP2L Loxodonta africana ENSLAFG00000027581 N 0.704
ENSMEUG00000004730 Macropus eugenii ENSMEUG00000004730 N 0.732
ENSMEUG00000008126 Macropus eugenii ENSMEUG00000008126 N 0.746
ENSMGAG00000002257 Meleagris gallopavo ENSMGAG00000002257 N 0.746
ENSMGAG00000006728 Meleagris gallopavo ENSMGAG00000006728 N 0.718
NCBP2 Microcebus murinus ENSMICG00000003162 N 0.746
NCBP2 Myotis lucifugus ENSMLUG00000017500 N 0.746
NCBP2 Macaca mulatta ENSMMUG00000007825 N 0.746
XM_001373408.1 Monodelphis domestica ENSMODG00000015908 N 0.746
XM_001371285.1 Monodelphis domestica ENSMODG00000023276 N 0.746
XM_001367531.1 Monodelphis domestica ENSMODG00000024607 N 0.718
LOC100020122 Monodelphis domestica ENSMODG00000024608 N 0.718
Ncbp2 Mus musculus ENSMUSG00000022774 N 0.746
NCBP2 Oryctolagus cuniculus ENSOCUG00000006738 N 0.746
ENSOCUG00000014372 Oryctolagus cuniculus ENSOCUG00000014372 N 0.732
NCBP2 Otolemur garnettii ENSOGAG00000005009 N 0.746
ENSOPRG00000007634 Ochotona princeps ENSOPRG00000007634 N 0.732
NCBP2 Oryzias latipes ENSORLG00000011235 N 0.704
NCBP2 Procavia capensis ENSPCAG00000003219 N 0.732
ENSPPYG00000014449 Pongo pygmaeus ENSPPYG00000014449 N 0.746
NCBP2 Pan troglodytes ENSPTRG00000015789 N 0.746
NCBP2 Pteropus vampyrus ENSPVAG00000017273 N 0.732
Pigz Rattus norvegicus ENSRNOG00000001746 N 0.746
ENSSSCG00000011835 Sus scrofa ENSSSCG00000011835 N 0.746
ENSSSCG00000011840 Sus scrofa ENSSSCG00000011840 N 0.746
ENSSTOG00000001584 Spermophilus tridecemlineatus ENSSTOG00000001584 N 0.746
NCBP2 Tupaia belangeri ENSTBEG00000015222 N 0.746
B5G279_TAEGU Taeniopygia guttata ENSTGUG00000007323 N 0.761
NCBP2 Taeniopygia guttata ENSTGUG00000008864 N 0.732
NCBP2 Tursiops truncatus ENSTTRG00000013908 N 0.746
NCBP2 Vicugna pacos ENSVPAG00000010369 N 0.732
ncbp2 Xenopus tropicalis ENSXETG00000019384 N 0.718
estExt_fgenesh1_kg.C_1730002 Daphnia pulex estExt_fgenesh1_kg.C_1730002 N 0.704
estExt_fgenesh2_kg.C_120041 Serpula lacrymans estExt_fgenesh2_kg.C_120041 N 0.701
estExt_fgenesh2_kg.C_20664 Agaricus bisporus estExt_fgenesh2_kg.C_20664 N 0.701
estExt_Genewise1.C_5160046 Capitella teleta estExt_Genewise1.C_5160046 N 0.704
estExt_Genewise1.C_sca_180152 Lottia gigantea estExt_Genewise1.C_sca_180152 N 0.732
estExt_Genewise1Plus.C_40730 Myceliophthora thermophila estExt_Genewise1Plus.C_40730 N 0.704
estExt_Genewise1Plus.C_50921 Neurospora discreta estExt_Genewise1Plus.C_50921 N 0.704
estExt_Genewise1_worm.C_60324 Laccaria bicolor estExt_Genewise1_worm.C_60324 N 0.701
e_gw1.121.83.1 Postia placenta e_gw1.121.83.1 N 0.727
e_gw1.18.125.1 Batrachochytrium dendrobatidis e_gw1.18.125.1 N 0.718
e_gw1.3.1174.1 Thielavia terrestris e_gw1.3.1174.1 N 0.704
Cbp20 Drosophila melanogaster FBgn0022943 N 0.718
GA11577-RA Drosophila pseudoobscura FBgn0071628 N 0.718
GF16759 Drosophila ananassae FBgn0093780 N 0.718
GG22670 Drosophila erecta FBgn0114835 N 0.718
GH15101 Drosophila grimshawi FBgn0122576 N 0.718
GI23717 Drosophila mojavensis FBgn0146442 N 0.718
GL12592 Drosophila persimilis FBgn0150198 N 0.718
GM15280 Drosophila sechellia FBgn0170200 N 0.718
GD19204 Drosophila simulans FBgn0190709 N 0.718
GJ18756 Drosophila virilis FBgn0205908 N 0.704
GJ23276 Drosophila virilis FBgn0210378 N 0.718
GK11244 Drosophila willistoni FBgn0213255 N 0.718
GE25514 Drosophila yakuba FBgn0242580 N 0.718
fgeneshMC_pm.5_#_40 Mucor circinelloides fgeneshMC_pm.5_#_40 N 0.704
gw.81.90.1 Branchiostoma floridae gw.81.90.1 N 0.789
gw.93.114.1 Branchiostoma floridae gw.93.114.1 N 0.789
gw1.1.2136.1 Pleurotus ostreatus gw1.1.2136.1 N 0.714
gw1.29.143.1 Phycomyces blakesleeanus gw1.29.143.1 N 0.704
gwh2.1.1054.1 Phanerochaete chrysosporium gwh2.1.1054.1 N 0.701
NCBP2_IXOSC Ixodes scapularis ISCW017479 N 0.732
nasonia_NCBI_hmm134534 Nasonia vitripennis nasonia_NCBI_hmm134534 N 0.775
nasonia_NCBI_hmm1532803 Nasonia vitripennis nasonia_NCBI_hmm1532803 N 0.789
NCU00210 Neurospora crassa NCU00210 N 0.704
P52299 Xenopus laevis P52299 N 0.704
Pa_7_2520 Podospora anserina Pa_7_2520 N 0.718
PHUM535920 Pediculus humanus PHUM535920 N 0.761
SPPG_00516 Spizellomyces punctatus SPPG_00516 N 0.732
XP_002160076.1 Hydra magnipapillata XP_002160076.1 N 0.732
XP_802051.1 Strongylocentrotus purpuratus XP_802051.1 N 1.000