TIAL1 (Homo sapiens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSG00000151923 T37282_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIAL1
M310_0.6		 Homo sapiens Sequence logo not available UUGCCACCUCCUGCUCCUGC RIP-chip
Cook et al.(2011)
500_17682065 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.893
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.893
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000358082 RRM 1 40
ENSP00000358082 RRM 60 85
ENSP00000358083 RRM 1 38
ENSP00000358083 RRM 76 140
ENSP00000358088 RRM 1 40
ENSP00000358088 RRM 60 130
ENSP00000358088 RRM 168 232
ENSP00000358089 RRM 11 96
ENSP00000358089 RRM 116 186
ENSP00000358089 RRM 224 288
ENSP00000394902 RRM 11 79
ENSP00000394902 RRM 99 169
ENSP00000394902 RRM 207 271
ENSP00000403573 RRM 1 40
ENSP00000403573 RRM 60 130

Links

Other RRM family RBPs
Other Homo sapiens RBPs

76 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SNRNP35 Anolis carolinensis ENSACAG00000015421 N 0.000
SNRNP35 Ornithorhynchus anatinus ENSOANG00000002697 N 0.000
SNRNP35 Oryctolagus cuniculus ENSOCUG00000021248 N 0.000
SNRNP35 Otolemur garnettii ENSOGAG00000011301 N 0.000
SNRNP35 Ochotona princeps ENSOPRG00000011119 N 0.000
SNRNP35 Oryzias latipes ENSORLG00000005673 N 0.000
SNRNP35 Procavia capensis ENSPCAG00000011478 N 0.000
ENSPPYG00000005088 Pongo pygmaeus ENSPPYG00000005088 N 0.000
SNRNP35 Pan troglodytes ENSPTRG00000023573 N 0.000
SNRNP35 Pteropus vampyrus ENSPVAG00000015317 N 0.000
Snrnp35 Rattus norvegicus ENSRNOG00000001060 N 0.000
SNRNP35 Sorex araneus ENSSARG00000012656 N 0.000
SNRNP35 Taeniopygia guttata ENSTGUG00000005364 N 0.000
B5G0X9_TAEGU Taeniopygia guttata ENSTGUG00000015471 N 0.000
SNRNP35 Tetraodon nigroviridis ENSTNIG00000009984 N 0.000
SNRNP35 Takifugu rubripes ENSTRUG00000017100 N 0.000
Ame_R000880 Ailuropoda melanoleuca Ame_R000880 N 0.000
AAI23362 Xenopus laevis AAI23362 N 0.000
Snrnp35 Mus musculus ENSMUSG00000029402 N 0.000
SNRNP35 Monodelphis domestica ENSMODG00000012481 N 0.000
U1SBP_BOVIN Bos taurus ENSBTAG00000008060 N 0.000
SNRNP35 Canis familiaris ENSCAFG00000007484 N 0.000
SNRNP35 Choloepus hoffmanni ENSCHOG00000006263 N 0.000
LOC100415261 Callithrix jacchus ENSCJAG00000007131 N 0.000
SNRNP35 Cavia porcellus ENSCPOG00000002548 N 0.000
snrnp35 Danio rerio ENSDARG00000044426 N 0.000
ENSDORG00000001859 Dipodomys ordii ENSDORG00000001859 N 0.000
LOC100059055 Equus caballus ENSECAG00000006080 N 0.000
SNRNP35 Erinaceus europaeus ENSEEUG00000011544 N 0.000
SNRNP35 Felis catus ENSFCAG00000001159 N 0.000
SNRNP35 Homo sapiens ENSG00000184209 N 0.000
SNRNP35 Gasterosteus aculeatus ENSGACG00000020631 N 0.000
SNRNP35 Gallus gallus ENSGALG00000003318 N 0.000
SNRNP35 Gorilla gorilla ENSGGOG00000015936 N 0.000
SNRNP35 Loxodonta africana ENSLAFG00000022302 N 0.000
SNRNP35 Meleagris gallopavo ENSMGAG00000003241 N 0.000
SNRNP35 Macaca mulatta ENSMMUG00000008411 N 0.000
Q05AT9 Xenopus laevis Q05AT9 N 0.000