CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MYEF2
(
Gasterosteus aculeatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGACG00000016759
T37544_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000022128
RRM
82
152
VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRSNSVVEFKDEEFVKKAIDTMNKHDLSGRPLN
ENSGACP00000022128
RRM
215
284
VFVANLDFKVGWKKLKEVFGMAGLVKRADVKEDKDGKSRGMGTVTFEQPLEAVQAISMFNGQMLFDRQMH
ENSGACP00000022128
RRM
511
579
IFVRNLSYDLTWQKLKEKFSHCGQVMFSDIKQENGKSKGCGTVRFDCPESAEKACRMMNGTKINGREVD
ENSGACP00000022130
RRM
38
108
VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKAIDTMNKHDLSGRPLN
ENSGACP00000022130
RRM
171
240
VFVANLDFKVGWKKLKEVFGMAGLVKRADVKEDKDGKSRGMGTVTFEQPLEAVQAISMFNGQMLFDRQMH
ENSGACP00000022130
RRM
448
516
IFVRNLSYDLTWQKLKEKFSHCGQVMFSDIKQENGKSKGCGTVRFDCPESAEKACRMMNGTKINGREVD
Links
Other
RRM
family RBPs
Other
Gasterosteus aculeatus
RBPs
72 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCL
Macropus eugenii
ENSMEUG00000012335
I
0.000
NCL
Monodelphis domestica
ENSMODG00000002470
I
0.000
NCL
Ornithorhynchus anatinus
ENSOANG00000008732
I
0.000
NCL
Anolis carolinensis
ENSACAG00000001006
N
0.000
AAI70089
Xenopus laevis
AAI70089
N
0.000
AAI70091
Xenopus laevis
AAI70091
N
0.000
CAA44805
Xenopus laevis
CAA44805
N
0.000
CAA51460
Xenopus laevis
CAA51460
N
0.000
P20397
Xenopus laevis
P20397
N
0.000