PMAA_027560 (Penicillium marneffei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PMAA_027560 T58264_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PMAA_027560.t1 RRM 204 274

Links

Other RRM family RBPs
Other Penicillium marneffei RBPs

44 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.746
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.775
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.718
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.775
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.704
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.746
augustus-scaffold_1.g441 Schizophyllum commune augustus-scaffold_1.g441 N 0.718
SPCC1827.05c Schizosaccharomyces pombe SPCC1827.05c N 0.718
NFIA_109800 Neosartorya fischeri CADNFIAG00009499 N 0.901
ATEG_05588 Aspergillus terreus CADATEAG00005000 N 0.901
eu2.Lbscf0011g04470 Laccaria bicolor eu2.Lbscf0011g04470 N 0.704
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.704
Pc22g17020 Penicillium chrysogenum Pc22g17020 N 0.845
gw1.11.934.1 Heterobasidion annosum gw1.11.934.1 N 0.718
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.775
fgeneshTM_pg.1_#_1063 Tremella mesenterica fgeneshTM_pg.1_#_1063 N 0.718
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.887
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.746
estExt_fgenesh2_kg.C_71062 Serpula lacrymans estExt_fgenesh2_kg.C_71062 N 0.732
EDP41651.1 Malassezia globosa EDP41651.1 N 0.718
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.775
AO090023000955 Aspergillus oryzae CADAORAG00008034 N 0.873
ANIA_04346 Aspergillus nidulans CADANIAG00006114 N 0.873
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.845
MGYG_01823 Microsporum gypseum MGYG_01823 N 0.817
MCYG_01275 Microsporum canis MCYG_01275 N 0.789
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.718
CPSG_03082 Coccidioides posadasii CPSG_03082 N 0.817
CIMG_04180 Coccidioides immitis CIMG_04180 N 0.817
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.746
BDBG_06195 Blastomyces dermatitidis BDBG_06195 N 0.831
ARB_01674 Arthroderma benhamiae ARB_01674 N 0.817
SOCG_03680 Schizosaccharomyces octosporus SOCG_03680 N 0.704
SS1G_03893 Sclerotinia sclerotiorum SS1G_03893 N 0.704
An04g00680 Aspergillus niger CADANGAG00003776 N 0.901
AFUA_4G06350 Aspergillus fumigatus CADAFUAG00008260 N 0.915
AFLA_113610 Aspergillus flavus CADAFLAG00005095 N 0.873
ACLA_045660 Aspergillus clavatus CADACLAG00004652 N 0.901
UREG_05625 Uncinocarpus reesii UREG_05625 N 0.803
TRV_00034 Trichophyton verrucosum TRV_00034 N 0.817
TESG_01475 Trichophyton tonsurans TESG_01475 N 0.817
TERG_07689 Trichophyton rubrum TERG_07689 N 0.817
TEQG_06916 Trichophyton equinum TEQG_06916 N 0.817
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.704