CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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XP_001187433.1
(
Strongylocentrotus purpuratus
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
XP_001187433.1
T62573_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_001187433.1
YTH
501
591
LIYSVNGSGHFCGVAEMMSEVDYTTNTGVWAQDKWKGRFDVRWVYVKDVPNSQLRHIRLENNDNKPVTNSRDTQEVLLDKAKQVMKIIHNF
Links
Other
YTH
family RBPs
Other
Strongylocentrotus purpuratus
RBPs
136 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SJAG_00259
Schizosaccharomyces japonicus
SJAG_00259
N
0.000
SPOG_02126
Schizosaccharomyces cryophilus
SPOG_02126
N
0.000
gar2
Schizosaccharomyces pombe
SPAC140.02
N
0.000