XP_001187433.1 (Strongylocentrotus purpuratus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 XP_001187433.1 T62573_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001187433.1 YTH 501 591

Links

Other YTH family RBPs
Other Strongylocentrotus purpuratus RBPs

136 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.780
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.791
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.780
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.813
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.791
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.780
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.780
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.813
YTHDF1 Pteropus vampyrus ENSPVAG00000017568 N 0.780
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.780
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.791
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.813
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.780
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.780
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.791
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 0.791
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.780
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.813
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.791
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.802
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.802
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.780
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.813
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.758
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.813
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.813
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.769
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.813
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.769
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 0.813
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.813
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.813
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.791
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.824
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 0.813
62837 Helobdella robusta 62837 N 0.736
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.780
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.747
e_gw.90.29.1 Nematostella vectensis e_gw.90.29.1 N 0.736
estExt_fgenesh1_pm.C_4090006 Capitella teleta estExt_fgenesh1_pm.C_4090006 N 0.747
BGIBMGA007551 Bombyx mori BGIBMGA007551 N 0.703
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.813
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.791
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.780
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.769
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.769
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 1.000
AAH60445 Xenopus laevis AAH60445 N 0.780
AAH68959 Xenopus laevis AAH68959 N 0.780
AAH78013 Xenopus laevis AAH78013 N 0.791
152141 Helobdella robusta 152141 N 0.714
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.780
ENSTNIG00000012490 Tetraodon nigroviridis ENSTNIG00000012490 N 0.791
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.747
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.813
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.813
ENSTRUG00000005049 Takifugu rubripes ENSTRUG00000005049 N 0.813
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.758
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.813
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.813
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.780
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.791
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.813
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.780
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.780
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.791
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.802
AAH81017 Xenopus laevis AAH81017 N 0.791
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.725
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.780
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.813
ENSCSAVG00000010987 Ciona savignyi ENSCSAVG00000010987 N 0.747
yth2 Danio rerio ENSDARG00000014498 N 0.813
ythdf1 Danio rerio ENSDARG00000016447 N 0.813
ythdf3 Danio rerio ENSDARG00000057939 N 0.780
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.791
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.780
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.813
LOC100060217 Equus caballus ENSECAG00000019475 N 0.791
LOC100070667 Equus caballus ENSECAG00000023108 N 0.813
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.791
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.813
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.780
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.813
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.780
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.791
AGAP003817 Anopheles gambiae AGAP003817 N 0.725
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.791
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.813
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 0.791
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.780
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.813
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.780
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.780
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.813
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.791
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.813
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.780
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.736
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.780
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.813
YTHDF2 Felis catus ENSFCAG00000012446 N 0.813
YTHDF1 Homo sapiens ENSG00000149658 N 0.791
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.813
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.813
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.791
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 0.791
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.813
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.780
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.791
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.813
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.780
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.791
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.813
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 0.791
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.813
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.791
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.791
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 0.791
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.813
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.780
YTHDF2 Homo sapiens ENSG00000198492 N 0.813
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 0.813
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.758
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.813
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.813
LOC419583 Gallus gallus ENSGALG00000000959 N 0.813
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.791
Q5ZLM1_CHICK Gallus gallus ENSGALG00000015505 N 0.791
LOC776373 Gallus gallus ENSGALG00000019473 N 0.791
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.791
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.813
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.780
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.791
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.780
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.813