BGIBMGA007551 (Bombyx mori)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 BGIBMGA007551 T62463_0.6 SilkDB (2008-Apr-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA007551 YTH 406 496

Links

Other YTH family RBPs
Other Bombyx mori RBPs

156 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm250744 Nasonia vitripennis nasonia_NCBI_hmm250744 N 0.879
estExt_fgenesh1_pm.C_4090006 Capitella teleta estExt_fgenesh1_pm.C_4090006 N 0.868
amel4_ncbi_hmm12284 Tribolium castaneum amel4_ncbi_hmm12284 N 0.857
amel4_ncbi_hmm12284 Apis mellifera amel4_ncbi_hmm12284 N 0.857
GL21952 Drosophila persimilis FBgn0159545 N 0.813
GK12904 Drosophila willistoni FBgn0214913 N 0.813
GA19581-RA Drosophila pseudoobscura FBgn0079577 N 0.813
GG12295 Drosophila erecta FBgn0104586 N 0.813
PHUM167190 Pediculus humanus PHUM167190 N 0.813
CG6422 Drosophila melanogaster FBgn0039261 N 0.802
DGIL_AUG5s6515g6t1 Acyrtosiphon pisum DGIL_AUG5s6515g6t1 N 0.802
CPIJ011115 Culex quinquefasciatus CPIJ011115 N 0.802
GM17761 Drosophila sechellia FBgn0172669 N 0.802
CPIJ011116 Culex quinquefasciatus CPIJ011116 N 0.802
AGAP003817 Anopheles gambiae AGAP003817 N 0.802
GF18592 Drosophila ananassae FBgn0095610 N 0.802
GD18245 Drosophila simulans FBgn0189779 N 0.802
152141 Helobdella robusta 152141 N 0.802
CpipJ_CPIJ011115 Culex pipiens CpipJ_CPIJ011115 N 0.802
GE10748 Drosophila yakuba FBgn0228591 N 0.802
CpipJ_CPIJ011116 Culex pipiens CpipJ_CPIJ011116 N 0.802
62837 Helobdella robusta 62837 N 0.780
GJ14120 Drosophila virilis FBgn0201338 N 0.780
AAEL005544 Aedes aegypti AAEL005544 N 0.780
GH22368 Drosophila grimshawi FBgn0129826 N 0.769
e_gw.462.3.1 Branchiostoma floridae e_gw.462.3.1 N 0.769
YTHDF2 Meleagris gallopavo ENSMGAG00000001610 N 0.758
YTHDF2 Procavia capensis ENSPCAG00000007587 N 0.758
YTHDF2 Erinaceus europaeus ENSEEUG00000011398 N 0.758
Ythdf2 Dipodomys ordii ENSDORG00000016564 N 0.758
LOC100070667 Equus caballus ENSECAG00000023108 N 0.758
Ame_R001131 Ailuropoda melanoleuca Ame_R001131 N 0.758
YTHDF2 Echinops telfairi ENSETEG00000017614 N 0.758
YTHDF2 Microcebus murinus ENSMICG00000003729 N 0.758
YTHDF2 Loxodonta africana ENSLAFG00000030451 N 0.758
YTHDF2 Gorilla gorilla ENSGGOG00000024069 N 0.758
YTHDF2 Pteropus vampyrus ENSPVAG00000017224 N 0.758
YTHDF2 Sorex araneus ENSSARG00000001187 N 0.758
XR_023164.1 Pan troglodytes ENSPTRG00000000439 N 0.758
YTHDF2 Homo sapiens ENSG00000198492 N 0.758
YTHDF2 Macropus eugenii ENSMEUG00000016488 N 0.758
YTHDF2 Tarsius syrichta ENSTSYG00000004178 N 0.758
YTHDF2 Felis catus ENSFCAG00000012446 N 0.758
YTHDF2 Ochotona princeps ENSOPRG00000017111 N 0.758
YTHDF2 Canis familiaris ENSCAFG00000011700 N 0.758
LOC419583 Gallus gallus ENSGALG00000000959 N 0.758
YTHDF2 Choloepus hoffmanni ENSCHOG00000000357 N 0.758
YTHD2_BOVIN Bos taurus ENSBTAG00000015771 N 0.758
YTHDF2 Oryctolagus cuniculus ENSOCUG00000010612 N 0.758
AAH68959 Xenopus laevis AAH68959 N 0.758
YTHDF2 Anolis carolinensis ENSACAG00000010846 N 0.758
YTHDF2 Myotis lucifugus ENSMLUG00000012606 N 0.758
Ythdf2 Mus musculus ENSMUSG00000040025 N 0.758
YTHDF2 Tursiops truncatus ENSTTRG00000013603 N 0.758
YTHDF2 Macaca mulatta ENSMMUG00000011391 N 0.758
YTHDF2 Callithrix jacchus ENSCJAG00000009804 N 0.758
YTHDF2 Cavia porcellus ENSCPOG00000019907 N 0.758
YTHDF2 Monodelphis domestica ENSMODG00000010973 N 0.758
YTHDF2 Otolemur garnettii ENSOGAG00000014648 N 0.758
YTHDF2 Ornithorhynchus anatinus ENSOANG00000006124 N 0.747
YTHDF2 Oryzias latipes ENSORLG00000014323 N 0.747
YTHDF2 Takifugu rubripes ENSTRUG00000011923 N 0.747
yth2 Danio rerio ENSDARG00000014498 N 0.747
ENSTNIG00000012698 Tetraodon nigroviridis ENSTNIG00000012698 N 0.747
YTHDF1 Cavia porcellus ENSCPOG00000010202 N 0.747
ythdf2 Xenopus tropicalis ENSXETG00000020636 N 0.747
AAH78013 Xenopus laevis AAH78013 N 0.747
YTHDF1 Bos taurus ENSBTAG00000010383 N 0.747
YTHDF2 Taeniopygia guttata ENSTGUG00000017347 N 0.747
YTHDF2 Tetraodon nigroviridis ENSTNIG00000017263 N 0.747
YTHDF2 Gasterosteus aculeatus ENSGACG00000009603 N 0.747
YTHDF1 Ochotona princeps ENSOPRG00000001758 N 0.736
ENSTTRG00000014564 Tursiops truncatus ENSTTRG00000014564 N 0.736
ENSTBEG00000005747 Tupaia belangeri ENSTBEG00000005747 N 0.736
ENSPVAG00000002740 Pteropus vampyrus ENSPVAG00000002740 N 0.736
ENSVPAG00000008104 Vicugna pacos ENSVPAG00000008104 N 0.736
YTHDF1 Tursiops truncatus ENSTTRG00000001804 N 0.736
Ythdf3 Rattus norvegicus ENSRNOG00000010084 N 0.736
YTHDF1 Oryctolagus cuniculus ENSOCUG00000012780 N 0.736
YTHDF1 Otolemur garnettii ENSOGAG00000000480 N 0.736
Ythdf1 Rattus norvegicus ENSRNOG00000027015 N 0.736
YTHDF1 Procavia capensis ENSPCAG00000002452 N 0.736
ENSPPYG00000011226 Pongo pygmaeus ENSPPYG00000011226 N 0.736
XR_024462.1 Pan troglodytes ENSPTRG00000030993 N 0.736
YTHDF1 Taeniopygia guttata ENSTGUG00000007565 N 0.736
ENSPPYG00000018626 Pongo pygmaeus ENSPPYG00000018626 N 0.736
ENSPCAG00000016282 Procavia capensis ENSPCAG00000016282 N 0.736
ENSSARG00000007626 Sorex araneus ENSSARG00000007626 N 0.736
ENSTSYG00000009117 Tarsius syrichta ENSTSYG00000009117 N 0.736
ENSOCUG00000008723 Oryctolagus cuniculus ENSOCUG00000008723 N 0.736
ENSTRUG00000007870 Takifugu rubripes ENSTRUG00000007870 N 0.736
YTHDF3 Taeniopygia guttata ENSTGUG00000011243 N 0.736
ENSMICG00000009379 Microcebus murinus ENSMICG00000009379 N 0.736
Ythdf3 Dipodomys ordii ENSDORG00000014699 N 0.736
Ythdf1 Dipodomys ordii ENSDORG00000002879 N 0.736
ythdf3 Danio rerio ENSDARG00000057939 N 0.736
ENSCPOG00000002961 Cavia porcellus ENSCPOG00000002961 N 0.736
LOC100060217 Equus caballus ENSECAG00000019475 N 0.736
ENSETEG00000007144 Echinops telfairi ENSETEG00000007144 N 0.736
Q5ZLM1_CHICK Gallus gallus ENSGALG00000015505 N 0.736
Q5ZME7_CHICK Gallus gallus ENSGALG00000005745 N 0.736
ENSG00000185728 Homo sapiens ENSG00000185728 N 0.736
A6MKQ0_CALJA Callithrix jacchus ENSCJAG00000010056 N 0.736
YTHDF3 Callithrix jacchus ENSCJAG00000009217 N 0.736
ENSACAG00000005560 Anolis carolinensis ENSACAG00000005560 N 0.736
Ame_R018798 Ailuropoda melanoleuca Ame_R018798 N 0.736
Ame_R014316 Ailuropoda melanoleuca Ame_R014316 N 0.736
ENSACAG00000016837 Anolis carolinensis ENSACAG00000016837 N 0.736
YTHDF3 Bos taurus ENSBTAG00000018557 N 0.736
ENSCHOG00000010194 Choloepus hoffmanni ENSCHOG00000010194 N 0.736
YTHDF1 Canis familiaris ENSCAFG00000012772 N 0.736
ENSCAFG00000007215 Canis familiaris ENSCAFG00000007215 N 0.736
LOC776373 Gallus gallus ENSGALG00000019473 N 0.736
YTHDF1 Erinaceus europaeus ENSEEUG00000007461 N 0.736
YTHDF1 Myotis lucifugus ENSMLUG00000002241 N 0.736
ENSMGAG00000011168 Meleagris gallopavo ENSMGAG00000011168 N 0.736
ENSMGAG00000006139 Meleagris gallopavo ENSMGAG00000006139 N 0.736
ENSMEUG00000011285 Macropus eugenii ENSMEUG00000011285 N 0.736
YTHDF1 Macaca mulatta ENSMMUG00000009227 N 0.736
ENSMODG00000008255 Monodelphis domestica ENSMODG00000008255 N 0.736
ENSOANG00000003723 Ornithorhynchus anatinus ENSOANG00000003723 N 0.736
Ythdf3 Mus musculus ENSMUSG00000047213 N 0.736
Ythdf1 Mus musculus ENSMUSG00000038848 N 0.736
ENSMODG00000016842 Monodelphis domestica ENSMODG00000016842 N 0.736
ENSLAFG00000016052 Loxodonta africana ENSLAFG00000016052 N 0.736
ENSMMUG00000006729 Macaca mulatta ENSMMUG00000006729 N 0.736
YTHDF1 Loxodonta africana ENSLAFG00000008884 N 0.736
ENSGGOG00000027681 Gorilla gorilla ENSGGOG00000027681 N 0.736
YTHDF1 Pteropus vampyrus ENSPVAG00000017568 N 0.725
ENSGACG00000002998 Gasterosteus aculeatus ENSGACG00000002998 N 0.725
AAH81017 Xenopus laevis AAH81017 N 0.725
YTHDF1 Homo sapiens ENSG00000149658 N 0.725
ythdf3 Xenopus tropicalis ENSXETG00000021659 N 0.725
YTHDF1 Gorilla gorilla ENSGGOG00000008340 N 0.725
ENSOANG00000005053 Ornithorhynchus anatinus ENSOANG00000005053 N 0.725
YTHDF1 Pan troglodytes ENSPTRG00000013730 N 0.725
AAH60445 Xenopus laevis AAH60445 N 0.714
e_gw.90.29.1 Nematostella vectensis e_gw.90.29.1 N 0.714
ENSCSAVG00000010987 Ciona savignyi ENSCSAVG00000010987 N 0.714
ythdf1 Xenopus tropicalis ENSXETG00000027086 N 0.714
ENSCING00000004166 Ciona intestinalis ENSCING00000004166 N 0.714
PGTG_07186 Puccinia graminis PGTG_07186 N 0.707
XP_786921.2 Strongylocentrotus purpuratus XP_786921.2 N 0.703
XP_002156821.1 Hydra magnipapillata XP_002156821.1 N 0.703
XP_001187433.1 Strongylocentrotus purpuratus XP_001187433.1 N 0.703
XP_002161951.1 Hydra magnipapillata XP_002161951.1 N 0.703
Aqu1.220420 Amphimedon queenslandica Aqu1.220420 N 0.703
ENSORLG00000009739 Oryzias latipes ENSORLG00000009739 N 0.703
ythdf1 Danio rerio ENSDARG00000016447 N 0.703
ENSTNIG00000003975 Tetraodon nigroviridis ENSTNIG00000003975 N 0.703
ENSTRUG00000004288 Takifugu rubripes ENSTRUG00000004288 N 0.703
ENSORLG00000014665 Oryzias latipes ENSORLG00000014665 N 0.703
ENSTRUG00000005049 Takifugu rubripes ENSTRUG00000005049 N 0.703
ENSGACG00000002613 Gasterosteus aculeatus ENSGACG00000002613 N 0.703
ENSORLG00000008640 Oryzias latipes ENSORLG00000008640 N 0.703
ENSGACG00000012014 Gasterosteus aculeatus ENSGACG00000012014 N 0.703