fubp3 (Xenopus tropicalis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSXETG00000001344 T19749_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSXETP00000002853 KH 80 142
ENSXETP00000002853 KH 165 229
ENSXETP00000002853 KH 256 318
ENSXETP00000002853 KH 357 422

Links

Other KH family RBPs
Other Xenopus tropicalis RBPs

78 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
A6QP83_BOVIN Bos taurus ENSBTAG00000013072 N 0.914
AAH44277 Xenopus laevis AAH44277 I 0.756
AAH60400 Xenopus laevis AAH60400 N 0.977
AAH70981 Xenopus laevis AAH70981 I 0.767
AAI69815 Xenopus laevis AAI69815 I 0.767
AAN77161 Xenopus laevis AAN77161 I 0.752
Ame_R003042 Ailuropoda melanoleuca Ame_R003042 N 0.926
Ame_R010564 Ailuropoda melanoleuca Ame_R010564 I 0.780
ENSDARG00000007049 Danio rerio ENSDARG00000007049 N 0.864
ENSGACG00000016563 Gasterosteus aculeatus ENSGACG00000016563 I 0.750
ENSORLG00000003540 Oryzias latipes ENSORLG00000003540 I 0.756
ENSPPYG00000001219 Pongo pygmaeus ENSPPYG00000001219 I 0.787
ENSPPYG00000019693 Pongo pygmaeus ENSPPYG00000019693 N 0.914
ENSSSCG00000003767 Sus scrofa ENSSSCG00000003767 I 0.783
ENSSSCG00000003771 Sus scrofa ENSSSCG00000003771 I 0.783
ENSTRUG00000004615 Takifugu rubripes ENSTRUG00000004615 I 0.756
FUBP1 Oryctolagus cuniculus ENSOCUG00000002225 I 0.737
FUBP1 Otolemur garnettii ENSOGAG00000014233 I 0.783
FUBP1 Ochotona princeps ENSOPRG00000001175 N 0.730
Fubp1 Mus musculus ENSMUSG00000028034 I 0.779
FUBP1 Macaca mulatta ENSMMUG00000002899 I 0.787
FUBP1 Tursiops truncatus ENSTTRG00000000096 I 0.783
FUBP1 Procavia capensis ENSPCAG00000012617 I 0.783
FUBP1 Pan troglodytes ENSPTRG00000000888 I 0.787
FUBP1 Spermophilus tridecemlineatus ENSSTOG00000014312 I 0.779
FUBP1 Taeniopygia guttata ENSTGUG00000006841 I 0.765
FUBP1 Tarsius syrichta ENSTSYG00000000148 I 0.783
FUBP1 Vicugna pacos ENSVPAG00000004709 I 0.783
fubp1 Xenopus tropicalis ENSXETG00000013137 I 0.775
FUBP1 Myotis lucifugus ENSMLUG00000014802 I 0.783
FUBP1 Ornithorhynchus anatinus ENSOANG00000009777 I 0.783
FUBP1 Anolis carolinensis ENSACAG00000006310 I 0.787
Fubp1 Dipodomys ordii ENSDORG00000016534 I 0.783
FUBP1 Equus caballus ENSECAG00000010867 I 0.783
fubp1 Danio rerio ENSDARG00000029248 I 0.767
FUBP1 Homo sapiens ENSG00000162613 I 0.787
FUBP1 Gorilla gorilla ENSGGOG00000027554 I 0.787
FUBP1 Loxodonta africana ENSLAFG00000003273 I 0.783
FUBP1 Cavia porcellus ENSCPOG00000002757 I 0.783
FUBP1 Callithrix jacchus ENSCJAG00000007062 I 0.783
FUBP1 Choloepus hoffmanni ENSCHOG00000008177 I 0.783
FUBP1 Canis familiaris ENSCAFG00000020361 I 0.783
FUBP1 Meleagris gallopavo ENSMGAG00000009424 I 0.775
Fubp3 Mus musculus ENSMUSG00000026843 N 0.914
FUBP3 Sus scrofa ENSSSCG00000005702 N 0.813
FUBP3 Gasterosteus aculeatus ENSGACG00000016704 N 0.833
FUBP3 Taeniopygia guttata ENSTGUG00000004662 N 0.953
FUBP3 Canis familiaris ENSCAFG00000019942 N 0.922
FUBP3 Tetraodon nigroviridis ENSTNIG00000005858 N 0.833
FUBP3 Tetraodon nigroviridis ENSTNIG00000009019 N 0.833
FUBP3 Dasypus novemcinctus ENSDNOG00000014533 N 0.907
FUBP3 Takifugu rubripes ENSTRUG00000013259 N 0.821
FUBP3 Takifugu rubripes ENSTRUG00000018658 N 0.833
FUBP3 Microcebus murinus ENSMICG00000015452 N 0.934
FUBP3 Felis catus ENSFCAG00000005113 N 0.918
Fubp3 Rattus norvegicus ENSRNOG00000009139 N 0.918
FUBP3 Pteropus vampyrus ENSPVAG00000001510 N 0.934
FUBP3 Myotis lucifugus ENSMLUG00000008743 N 0.860
FUBP3 Gorilla gorilla ENSGGOG00000011318 N 0.914
FUBP3 Otolemur garnettii ENSOGAG00000007555 N 0.798
FUBP3 Ornithorhynchus anatinus ENSOANG00000001042 N 0.957
FUBP3 Loxodonta africana ENSLAFG00000011611 N 0.926
FUBP3 Monodelphis domestica ENSMODG00000012105 N 0.938
FUBP3 Macaca mulatta ENSMMUG00000008249 N 0.914
FUBP3 Meleagris gallopavo ENSMGAG00000005342 N 0.953
FUBP3 Ochotona princeps ENSOPRG00000008648 N 0.926
FUBP3 Cavia porcellus ENSCPOG00000010315 N 0.922
FUBP3 Oryzias latipes ENSORLG00000007103 N 0.825
FUBP3 Oryzias latipes ENSORLG00000017565 N 0.837
FUBP3 Procavia capensis ENSPCAG00000001717 N 0.899
FUBP3 Gasterosteus aculeatus ENSGACG00000000957 N 0.702
FUBP3 Pan troglodytes ENSPTRG00000021474 N 0.914
FUBP3 Homo sapiens ENSG00000107164 N 0.914
LOC100069755 Equus caballus ENSECAG00000011500 N 0.891
LOC100399862 Callithrix jacchus ENSCJAG00000020542 N 0.918
Q08DJ3_BOVIN Bos taurus ENSBTAG00000008926 I 0.783
Q5ZHW0_CHICK Gallus gallus ENSGALG00000008939 I 0.780
Q5ZM76_CHICK Gallus gallus ENSGALG00000003941 N 0.953